Entry information : AhalPrx21 (Araha.4285s0011)
Entry ID 14802
Creation 2018-01-09 (Christophe Dunand)
Last sequence changes 2018-01-09 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2018-01-10 (Christophe Dunand)
Peroxidase information: AhalPrx21 (Araha.4285s0011)
Name (synonym) AhalPrx21 (Araha.4285s0011)
Class Class III peroxidase     [Orthogroup: Prx025]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Arabidopsis
Organism Arabidopsis halleri    [TaxId: 81970 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AhalPrx21
start..stop
S start..stop
AlyPrx44-2 265 2e-89 1..131 1..131
AlyPrx44-2 174 7e-54 132..218 226..312
AlyPrx44-1 265 2e-89 1..131 1..131
AlyPrx44-1 173 1e-53 131..218 225..312
CrubPrx117 258 4e-87 1..131 1..131
CrubPrx117 166 5e-51 131..218 225..312
CrubPrx65 256 2e-86 1..131 1..131
CrubPrx65 166 6e-51 131..218 225..312
Literature and cross-references AhalPrx21 (Araha.4285s0011)
Protein sequence: AhalPrx21 (Araha.4285s0011)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   218 (198)
PWM (Da):   %s   24217.56 (21891.3)  
PI (pH):   %s   11.33 (11.35) Peptide Signal:   %s   cut: 21 range:21-218
Sequence
Send to BLAST
Send to Peroxiscan
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MRAITALFFL FCFVAPSALA QLRQGFYGRS CPRAESIVAN VVANRFRRDR SITAAFLRMQ FHDCFVRGCD ASLLIDPRPG RPSEKSTGPN ASVRGYEVID EAKRQLEAAC PRTVSCADIV 
TLATRDSVAL AVFLDQRTPF TVDNAIYGEI RRQRGILRID QNLGLSGSTR GIVSSFASSN TLFRQRFAQA MVKMGTIRVL TGRSGEIRRN CRVFNNGR* 

Retrieve as FASTA  
Remarks Partial sequence from genomic. Fragment (exon 3) is missing due to N in the sequence.
DNA
Send to BLAST
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TTATAACATT CACAGGAGAG GGAAGGAAAA GCTCATCATA CGAAATGAGG GCAATCACAG CTTTGTTTTT CCTTTTCTGT TTCGTTGCTC CCTCTGCTTT GGCGCAGCTC CGACAAGGGT  TCTACGGCCG CTCATGCCCT CGAGCTGAAT CTATCGTTGC TAATGTAGTT GCCAACCGTT TCCGCCGTGA CCGTTCCATC ACTGCTGCAT TTCTTCGTAT GCAGTTTCAT GATTGCTTTG  TCAGGGTTCG TAAGCTTCTC CTTGCATGTG TGTATATGTA TATCGTAAAC TAGTTATCAT CTAGACATAA CACTGATCAA GCTATGTTTT TAATGGTTGT GTAGGGTTGT GATGCTTCCC  TCTTGATCGA CCCAAGACCT GGAAGGCCAT CAGAGAAAAG CACTGGACCA AACGCAAGCG TGAGAGGCTA CGAGGTCATT GATGAGGCTA AGAGACAACT AGAGGCTGCA TGTCCCCGAA  CAGTCTCATG CGCAGACATT GTAACTCTAG CCACAAGAGA CTCGGTCGCT TTAGCCGGCG nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn  nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn  nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn  nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn  nnnCTAGGTT GAGGAACACA TGTCGTGCCC CAAATGACCC ATCAGTCTTT TTGGACCAAA GGACTCCATT TACTGTGGAT AACGCTATTT ATGGAGAGAT CCGAAGACAA AGAGGAATTC  TAAGAATTGA TCAAAACTTG GGTCTCTCTG GATCGACCCG TGGGATTGTG TCGAGTTTTG CATCAAGCAA TACACTCTTC AGACAGAGAT TTGCCCAAGC AATGGTGAAA ATGGGCACCA 
TTAGGGTTCT CACTGGACGG TCTGGAGAGA TCAGGAGAAA CTGCAGAGTC TTCAACAACG GACGTTGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGAGGGCAA TCACAGCTTT GTTTTTCCTT TTCTGTTTCG TTGCTCCCTC TGCTTTGGCG CAGCTCCGAC AAGGGTTCTA CGGCCGCTCA TGCCCTCGAG CTGAATCTAT CGTTGCTAAT  GTAGTTGCCA ACCGTTTCCG CCGTGACCGT TCCATCACTG CTGCATTTCT TCGTATGCAG TTTCATGATT GCTTTGTCAG GGGTTGTGAT GCTTCCCTCT TGATCGACCC AAGACCTGGA  AGGCCATCAG AGAAAAGCAC TGGACCAAAC GCAAGCGTGA GAGGCTACGA GGTCATTGAT GAGGCTAAGA GACAACTAGA GGCTGCATGT CCCCGAACAG TCTCATGCGC AGACATTGTA  ACTCTAGCCA CAAGAGACTC GGTCGCTTTA GCCGTCTTTT TGGACCAAAG GACTCCATTT ACTGTGGATA ACGCTATTTA TGGAGAGATC CGAAGACAAA GAGGAATTCT AAGAATTGAT  CAAAACTTGG GTCTCTCTGG ATCGACCCGT GGGATTGTGT CGAGTTTTGC ATCAAGCAAT ACACTCTTCA GACAGAGATT TGCCCAAGCA ATGGTGAAAA TGGGCACCAT TAGGGTTCTC 
ACTGGACGGT CTGGAGAGAT CAGGAGAAAC TGCAGAGTCT TCAACAACGG ACGTTGA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TTATAACATT CACAGGAGAG GGAAGGAAAA GCTCATCATA CGAAATGAGG GCAATCACAG CTTTGTTTTT CCTTTTCTGT TTCGTTGCTC CCTCTGCTTT GGCGCAGCTC CGACAAGGGT  TCTACGGCCG CTCATGCCCT CGAGCTGAAT CTATCGTTGC TAATGTAGTT GCCAACCGTT TCCGCCGTGA CCGTTCCATC ACTGCTGCAT TTCTTCGTAT GCAGTTTCAT GATTGCTTTG  TCAGGGGTTG TGATGCTTCC CTCTTGATCG ACCCAAGACC TGGAAGGCCA TCAGAGAAAA GCACTGGACC AAACGCAAGC GTGAGAGGCT ACGAGGTCAT TGATGAGGCT AAGAGACAAC  TAGAGGCTGC ATGTCCCCGA ACAGTCTCAT GCGCAGACAT TGTAACTCTA GCCACAAGAG ACTCGGTCGC TTTAGCCGTC TTTTTGGACC AAAGGACTCC ATTTACTGTG GATAACGCTA  TTTATGGAGA GATCCGAAGA CAAAGAGGAA TTCTAAGAAT TGATCAAAAC TTGGGTCTCT CTGGATCGAC CCGTGGGATT GTGTCGAGTT TTGCATCAAG CAATACACTC TTCAGACAGA 
GATTTGCCCA AGCAATGGTG AAAATGGGCA CCATTAGGGT TCTCACTGGA CGGTCTGGAG AGATCAGGAG AAACTGCAGA GTCTTCAACA ACGGACGTTG A 

Retrieve as FASTA