Entry information : AhalPrx26 (Araha.8952s0001)
Entry ID 14807
Creation 2018-01-09 (Christophe Dunand)
Last sequence changes 2018-01-09 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2018-01-10 (Christophe Dunand)
Peroxidase information: AhalPrx26 (Araha.8952s0001)
Name (synonym) AhalPrx26 (Araha.8952s0001)
Class Class III peroxidase     [Orthogroup: Prx040]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Arabidopsis
Organism Arabidopsis halleri    [TaxId: 81970 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AhalPrx26
start..stop
S start..stop
AlyPrx23 397 2e-141 1..197 1..197
AtPrx23 374 3e-132 1..197 1..197
AlyPrx22 368 8e-130 1..197 1..197
AhalPrx38 367 3e-129 1..197 1..197
Literature and cross-references AhalPrx26 (Araha.8952s0001)
Protein sequence: AhalPrx26 (Araha.8952s0001)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   212 (183)
PWM (Da):   %s   23161.82 (20134.4)  
PI (pH):   %s   8.29 (8.51) Peptide Signal:   %s   cut: 30 range:30-212
Sequence
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Send to Peroxiscan
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MGFSPSFSCS AMGALILGCL LLQASNSNAQ LRPDFYFRTC PSVFRIIGDT IVDELRTDPR IAASILRLHF HDCFVRGCDA SILLDNSTSF RTEKDAAPNK NSVRGFNVID RMKSAIERAC 
PRTVSCADML TIASQISVLL SGGPWWPVPL GRRDSIEAFF NLANTALPSP FSTLTQLKAA FADVGLNRAS DLVALSGNFF MLLQFISSKI TR* 

Retrieve as FASTA  
Remarks Partial sequence from genomic. 3'end (last exon) is missing due to N in the sequence.
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGGTTTT CGCCTTCATT TTCTTGCAGT GCAATGGGAG CCCTAATATT GGGTTGCCTT CTGCTTCAAG CATCAAACTC TAATGCTCAG TTGAGGCCTG ACTTCTACTT CAGGACTTGC  CCATCTGTTT TCAGAATCAT TGGGGATACC ATCGTCGATG AACTGCGGAC TGATCCTCGT ATTGCCGCGA GCATCCTTCG TCTTCACTTC CACGACTGCT TTGTTCGTGT AAGGACTTAC  TCAGTGTATC TTTTTCTTAT TTTTTTAAAT CCACGACGTC TACTTTTACA TATATATTGA ATCGAAGCTA GAAGACCTTT TTGAATAATA AATAATGTCT TCATATTATG TGATATATAT  GGTTTTTGTA GGGTTGTGAT GCATCCATCT TGCTTGACAA TTCCACATCA TTCCGGACCG AGAAAGATGC TGCTCCAAAC AAAAATTCGG TTAGAGGGTT CAATGTCATA GATAGAATGA  AATCAGCCAT TGAGAGAGCT TGCCCAAGAA CAGTATCTTG TGCAGATATG CTCACCATCG CCTCTCAAAT ATCAGTGCTT TTGGTATGTA CATATATATA CCTAAATGAC TAATGATATC  GATCGGGTGA AGTTAATCCA AATATATTAT GAATTTGACA TCAATACTTT ATATGTTATA TAGTCTGGGG GTCCATGGTG GCCGGTTCCC TTGGGGAGAA GAGACAGCAT AGAAGCTTTC  TTCAACCTGG CTAATACAGC TCTTCCCTCT CCGTTTTCCA CTCTTACTCA ACTTAAAGCA GCTTTTGCTG ACGTTGGCCT AAACCGGGCT TCGGATCTAG TCGCTCTTTC CGGTAATTTT 
TTCATGTTGC TTCAATTTAT ATCATCTAAG ATAACTAGAT AA 

Retrieve as FASTA  
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGGTTTT CGCCTTCATT TTCTTGCAGT GCAATGGGAG CCCTAATATT GGGTTGCCTT CTGCTTCAAG CATCAAACTC TAATGCTCAG TTGAGGCCTG ACTTCTACTT CAGGACTTGC  CCATCTGTTT TCAGAATCAT TGGGGATACC ATCGTCGATG AACTGCGGAC TGATCCTCGT ATTGCCGCGA GCATCCTTCG TCTTCACTTC CACGACTGCT TTGTTCGTGG TTGTGATGCA  TCCATCTTGC TTGACAATTC CACATCATTC CGGACCGAGA AAGATGCTGC TCCAAACAAA AATTCGGTTA GAGGGTTCAA TGTCATAGAT AGAATGAAAT CAGCCATTGA GAGAGCTTGC  CCAAGAACAG TATCTTGTGC AGATATGCTC ACCATCGCCT CTCAAATATC AGTGCTTTTG TCTGGGGGTC CATGGTGGCC GGTTCCCTTG GGGAGAAGAG ACAGCATAGA AGCTTTCTTC  AACCTGGCTA ATACAGCTCT TCCCTCTCCG TTTTCCACTC TTACTCAACT TAAAGCAGCT TTTGCTGACG TTGGCCTAAA CCGGGCTTCG GATCTAGTCG CTCTTTCCGG TAATTTTTTC 
ATGTTGCTTC AATTTATATC ATCTAAGATA ACTAGATAA 

Retrieve as FASTA  
cDNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGGTTTT CGCCTTCATT TTCTTGCAGT GCAATGGGAG CCCTAATATT GGGTTGCCTT CTGCTTCAAG CATCAAACTC TAATGCTCAG TTGAGGCCTG ACTTCTACTT CAGGACTTGC  CCATCTGTTT TCAGAATCAT TGGGGATACC ATCGTCGATG AACTGCGGAC TGATCCTCGT ATTGCCGCGA GCATCCTTCG TCTTCACTTC CACGACTGCT TTGTTCGTGG TTGTGATGCA  TCCATCTTGC TTGACAATTC CACATCATTC CGGACCGAGA AAGATGCTGC TCCAAACAAA AATTCGGTTA GAGGGTTCAA TGTCATAGAT AGAATGAAAT CAGCCATTGA GAGAGCTTGC  CCAAGAACAG TATCTTGTGC AGATATGCTC ACCATCGCCT CTCAAATATC AGTGCTTTTG TCTGGGGGTC CATGGTGGCC GGTTCCCTTG GGGAGAAGAG ACAGCATAGA AGCTTTCTTC  AACCTGGCTA ATACAGCTCT TCCCTCTCCG TTTTCCACTC TTACTCAACT TAAAGCAGCT TTTGCTGACG TTGGCCTAAA CCGGGCTTCG GATCTAGTCG CTCTTTCCGG TAATTTTTTC 
ATGTTGCTTC AATTTATATC ATCTAAGATA ACTAGATAA 

Retrieve as FASTA