Entry information : AhalPrx31 (Araha.24955s0003)
Entry ID 14812
Creation 2018-01-09 (Christophe Dunand)
Last sequence changes 2018-01-09 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2018-01-10 (Christophe Dunand)
Peroxidase information: AhalPrx31 (Araha.24955s0003)
Name (synonym) AhalPrx31 (Araha.24955s0003)
Class Class III peroxidase     [Orthogroup: Prx027]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Arabidopsis
Organism Arabidopsis halleri    [TaxId: 81970 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AhalPrx31
start..stop
S start..stop
AlyPrx55 323 5e-113 1..162 1..162
AlyPrx55 59 0.00000000007 161..188 303..330
AtPrx55 309 2e-107 1..162 1..162
AtPrx55 57 0.0000000002 161..188 303..330
BstrPrx41 306 3e-106 1..162 7..168
BstrPrx41 55 0.000000001 161..188 309..336
CagraPrx38 288 1e-98 1..162 1..164
CagraPrx38 57 0.0000000003 162..188 313..339
Literature and cross-references AhalPrx31 (Araha.24955s0003)
Protein sequence: AhalPrx31 (Araha.24955s0003)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   188 (158)
PWM (Da):   %s   20240.97 (16680.3)  
PI (pH):   %s   4.71 (4.78) Peptide Signal:   %s   cut: 31 range:31-188
Sequence
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Send to Peroxiscan
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MDTRRDDATK PMTMWFLGML LFSMVAESNA QLSENYYAST CPNVELIVKQ AVNTKFQQTP TTAPATLRMF FHDCFVEGCD ASVLIASDNE DAEKDASDNK SLAGDGFDTV IKAKTAVESQ 
CPGVVSCADI LALAARDVVV LVGGPEFKVE LGRRDGLVSQ ASAMRNLGRV GVKVGSKGEI RRDCSAFN* 

Retrieve as FASTA  
Remarks Partial sequence from genomic. Fragment (end of exon 3 and start of exon 4) is missing due to N in the sequence.
DNA
Send to BLAST
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TTTTAATCAT CAAATAACTT TTTTCTTTAA CAAAAAAATA AAACCACATT TATACTATAG ACTTGATCCA GCGGCTATAG ATAAATGCGG TGGCATATCG GAGGGTCAAA AAAGATTGCT  GTGGTCCTAT ATATTCAAGA GTGGACTGTA TCAAGAGAAG AGTCTAAAGA ACACAGAAAT TAAAGGAGAA AATATACCAA GATGGATACT CGTAGGGATG ATGCAACAAA ACCCATGACG  ATGTGGTTTT TGGGGATGCT GTTGTTTTCC ATGGTGGCCG AGTCAAATGC CCAACTGTCG GAGAATTACT ACGCCTCGAC ATGTCCTAAC GTCGAGCTCA TCGTTAAGCA GGCGGTTAAT  ACAAAATTCC AACAAACTCC CACGACGGCT CCGGCAACGT TACGGATGTT CTTTCACGAC TGCTTCGTCG AGGTATGTAC AAACAATAGA GGCTAGCTTT TGTAGATATT TAAAGTTTTA  TGGAGTCCTT TTGGTATTTG TGAATTATAA TAATTTTGGT TGGTTTTTTT TTAGGGATGT GATGCGTCTG TGTTGATAGC ATCTGATAAT GAAGACGCAG AGAAGGACGC GTCGGACAAT  AAATCTCTCG CCGGAGACGG ATTTGACACT GTGATTAAAG CTAAAACCGC TGTAGAATCT CAATGTCCCG GCGTTGTGTC ATGTGCCGAT ATACTAGCTC TCGCCGCAAG AGACGTCGTC  GTGCTCGTAA GTCCACTCTC TGAAGTCACT GACGTTTCAT TTGATTTCCC CAAGTAAAAG TCATTTACTT TGTGATGATA ACAGGTTGGA GGGCCAGAGT TTAAGGTGGA GCTAGGGAGA  CGAGACGGGC TCGTGTCGCA AGCGTCTnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn  nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn  nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn  nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn  nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnGCTTTT AGCTCTGCTA TGAGGAATCT TGGCCGCGTT GGTGTTAAGG TTGGGAGCAA AGGAGAGATT CGAAGGGACT GCTCTGCTTT 
TAACTAG 

Retrieve as FASTA  
CDS
Send to BLAST
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ATGGATACTC GTAGGGATGA TGCAACAAAA CCCATGACGA TGTGGTTTTT GGGGATGCTG TTGTTTTCCA TGGTGGCCGA GTCAAATGCC CAACTGTCGG AGAATTACTA CGCCTCGACA  TGTCCTAACG TCGAGCTCAT CGTTAAGCAG GCGGTTAATA CAAAATTCCA ACAAACTCCC ACGACGGCTC CGGCAACGTT ACGGATGTTC TTTCACGACT GCTTCGTCGA GGGATGTGAT  GCGTCTGTGT TGATAGCATC TGATAATGAA GACGCAGAGA AGGACGCGTC GGACAATAAA TCTCTCGCCG GAGACGGATT TGACACTGTG ATTAAAGCTA AAACCGCTGT AGAATCTCAA  TGTCCCGGCG TTGTGTCATG TGCCGATATA CTAGCTCTCG CCGCAAGAGA CGTCGTCGTG CTCGTTGGAG GGCCAGAGTT TAAGGTGGAG CTAGGGAGAC GAGACGGGCT CGTGTCGCAA 
GCCTCTGCTA TGAGGAATCT TGGCCGCGTT GGTGTTAAGG TTGGGAGCAA AGGAGAGATT CGAAGGGACT GCTCTGCTTT TAACTAG 

Retrieve as FASTA  
cDNA
Send to BLAST
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TTTTAATCAT CAAATAACTT TTTTCTTTAA CAAAAAAATA AAACCACATT TATACTATAG ACTTGATCCA GCGGCTATAG ATAAATGCGG TGGCATATCG GAGGGTCAAA AAAGATTGCT  GTGGTCCTAT ATATTCAAGA GTGGACTGTA TCAAGAGAAG AGTCTAAAGA ACACAGAAAT TAAAGGAGAA AATATACCAA GATGGATACT CGTAGGGATG ATGCAACAAA ACCCATGACG  ATGTGGTTTT TGGGGATGCT GTTGTTTTCC ATGGTGGCCG AGTCAAATGC CCAACTGTCG GAGAATTACT ACGCCTCGAC ATGTCCTAAC GTCGAGCTCA TCGTTAAGCA GGCGGTTAAT  ACAAAATTCC AACAAACTCC CACGACGGCT CCGGCAACGT TACGGATGTT CTTTCACGAC TGCTTCGTCG AGGGATGTGA TGCGTCTGTG TTGATAGCAT CTGATAATGA AGACGCAGAG  AAGGACGCGT CGGACAATAA ATCTCTCGCC GGAGACGGAT TTGACACTGT GATTAAAGCT AAAACCGCTG TAGAATCTCA ATGTCCCGGC GTTGTGTCAT GTGCCGATAT ACTAGCTCTC  GCCGCAAGAG ACGTCGTCGT GCTCGTTGGA GGGCCAGAGT TTAAGGTGGA GCTAGGGAGA CGAGACGGGC TCGTGTCGCA AGCCTCTGCT ATGAGGAATC TTGGCCGCGT TGGTGTTAAG 
GTTGGGAGCA AAGGAGAGAT TCGAAGGGAC TGCTCTGCTT TTAACTAG 

Retrieve as FASTA