Entry information : AhalPrx61 (Araha.5997s0001)
Entry ID 14842
Creation 2018-01-09 (Christophe Dunand)
Last sequence changes 2018-01-09 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2018-01-10 (Christophe Dunand)
Peroxidase information: AhalPrx61 (Araha.5997s0001)
Name (synonym) AhalPrx61 (Araha.5997s0001)
Class Class III peroxidase     [Orthogroup: Prx005]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Arabidopsis
Organism Arabidopsis halleri    [TaxId: 81970 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AhalPrx61
start..stop
S start..stop
AlyPrx69 502 0 1..254 79..332
AtPrx69 489 2e-177 1..254 79..331
CagraPrx72 473 9e-171 1..254 79..331
CrubPrx53 471 7e-170 1..254 79..331
Literature and cross-references AhalPrx61 (Araha.5997s0001)
Protein sequence: AhalPrx61 (Araha.5997s0001)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   254
PWM (Da):   %s   27340.26  
PI (pH):   %s   8.72
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CFVRGCDGSV LLAGNTSERT AVPNRSLRGF EVIEEAKARL EKACPRTVSC ADILTLAARD AVVLTGGQRW EVPLGRLDGR ISQASDVNLP GPSDSVAKQK QDFAAKTLNT LDLVTLVGGH  TIGTAGCGLV RGRFFNFNGT GQPDPSIDPS FVPLIQAQCP QNGGTRVELD EGSVGRFDTS FLRKVTSSRV VLQSDLVLWR DPETRVIIER LLGLRRPSLR FGAEFGKSMV KMSLIEVKTG 
SADGEIRRVC SAIN* 

Retrieve as FASTA  
Remarks Partial sequence from genomic. 5'end (exon 1) is missing due to scaffold border.
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TGCTTTGTCC GTGGCTGCGA TGGCTCGGTT CTCCTCGCTG GTAACACCTC AGAGAGAACC GCAGTTCCAA ACCGTTCACT GAGAGGGTTC GAAGTTATTG AAGAGGCTAA GGCTCGGCTT  GAGAAGGCTT GTCCTCGAAC CGTTTCTTGT GCTGATATTC TCACCCTTGC TGCTCGAGAC GCCGTCGTTT TGGTAATATA CTGAAATTAT TACACGCACT ATATCATAAT TCGGTTTCTT  ATCCGTGTCA CATGATTAAA ATATATAGCA CTTATGGTCT CGTGTTTAAC GGTAATTTAA TATTGGTTTA TGCAGACCGG TGGACAACGC TGGGAAGTGC CATTGGGACG TCTCGACGGC  CGAATCTCGC AAGCCTCAGA CGTGAACTTG CCCGGACCAA GCGACTCAGT CGCTAAGCAG AAGCAAGACT TCGCTGCTAA AACTCTTAAC ACATTAGACC TCGTAACTCT TGTTGGTACG  TTGTCATTGC ATATGGTTTA AATGTAACAC TTAATAATGA TTCAGAAAAG TAATTAGCTC GTATATATAC TATATATCCT ACTAGCTAAT GACTAAGTGA GTTTTTTGGT TTTGACCAGG  CGGACACACA ATAGGAACTG CTGGCTGCGG TCTAGTAAGG GGAAGGTTCT TTAACTTCAA CGGCACAGGA CAACCCGACC CATCAATCGA CCCGAGTTTT GTGCCGCTGA TTCAGGCTCA  GTGCCCTCAA AATGGAGGCA CCCGAGTCGA GTTAGATGAG GGAAGTGTCG GCAGGTTTGA CACATCGTTC CTAAGGAAGG TGACGTCAAG TCGCGTGGTT CTTCAATCCG ATCTAGTCCT  ATGGAGGGAT CCCGAGACCC GAGTCATCAT TGAACGGTTA TTAGGTTTAC GCCGACCATC CTTGAGGTTC GGAGCCGAGT TCGGGAAGTC GATGGTCAAG ATGAGTCTCA TAGAAGTTAA  GACTGGATCA GCTGATGGGG AGATTCGTAG GGTTTGCTCT GCGATCAACT AAGAATTAAA AAAACACAAA TGTGTGCTTT ATTTTTAATT TATGAATTTT ATAACTAATA ATCATTTGTT 
TTTAAGCTTG CTACAGCATT TTGTGGTCGA TGGT 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TGCTTTGTCC GTGGCTGCGA TGGCTCGGTT CTCCTCGCTG GTAACACCTC AGAGAGAACC GCAGTTCCAA ACCGTTCACT GAGAGGGTTC GAAGTTATTG AAGAGGCTAA GGCTCGGCTT  GAGAAGGCTT GTCCTCGAAC CGTTTCTTGT GCTGATATTC TCACCCTTGC TGCTCGAGAC GCCGTCGTTT TGACCGGTGG ACAACGCTGG GAAGTGCCAT TGGGACGTCT CGACGGCCGA  ATCTCGCAAG CCTCAGACGT GAACTTGCCC GGACCAAGCG ACTCAGTCGC TAAGCAGAAG CAAGACTTCG CTGCTAAAAC TCTTAACACA TTAGACCTCG TAACTCTTGT TGGCGGACAC  ACAATAGGAA CTGCTGGCTG CGGTCTAGTA AGGGGAAGGT TCTTTAACTT CAACGGCACA GGACAACCCG ACCCATCAAT CGACCCGAGT TTTGTGCCGC TGATTCAGGC TCAGTGCCCT  CAAAATGGAG GCACCCGAGT CGAGTTAGAT GAGGGAAGTG TCGGCAGGTT TGACACATCG TTCCTAAGGA AGGTGACGTC AAGTCGCGTG GTTCTTCAAT CCGATCTAGT CCTATGGAGG  GATCCCGAGA CCCGAGTCAT CATTGAACGG TTATTAGGTT TACGCCGACC ATCCTTGAGG TTCGGAGCCG AGTTCGGGAA GTCGATGGTC AAGATGAGTC TCATAGAAGT TAAGACTGGA 
TCAGCTGATG GGGAGATTCG TAGGGTTTGC TCTGCGATCA ACTAA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TGCTTTGTCC GTGGCTGCGA TGGCTCGGTT CTCCTCGCTG GTAACACCTC AGAGAGAACC GCAGTTCCAA ACCGTTCACT GAGAGGGTTC GAAGTTATTG AAGAGGCTAA GGCTCGGCTT  GAGAAGGCTT GTCCTCGAAC CGTTTCTTGT GCTGATATTC TCACCCTTGC TGCTCGAGAC GCCGTCGTTT TGACCGGTGG ACAACGCTGG GAAGTGCCAT TGGGACGTCT CGACGGCCGA  ATCTCGCAAG CCTCAGACGT GAACTTGCCC GGACCAAGCG ACTCAGTCGC TAAGCAGAAG CAAGACTTCG CTGCTAAAAC TCTTAACACA TTAGACCTCG TAACTCTTGT TGGCGGACAC  ACAATAGGAA CTGCTGGCTG CGGTCTAGTA AGGGGAAGGT TCTTTAACTT CAACGGCACA GGACAACCCG ACCCATCAAT CGACCCGAGT TTTGTGCCGC TGATTCAGGC TCAGTGCCCT  CAAAATGGAG GCACCCGAGT CGAGTTAGAT GAGGGAAGTG TCGGCAGGTT TGACACATCG TTCCTAAGGA AGGTGACGTC AAGTCGCGTG GTTCTTCAAT CCGATCTAGT CCTATGGAGG  GATCCCGAGA CCCGAGTCAT CATTGAACGG TTATTAGGTT TACGCCGACC ATCCTTGAGG TTCGGAGCCG AGTTCGGGAA GTCGATGGTC AAGATGAGTC TCATAGAAGT TAAGACTGGA  TCAGCTGATG GGGAGATTCG TAGGGTTTGC TCTGCGATCA ACTAAGAATT AAAAAAACAC AAATGTGTGC TTTATTTTTA ATTTATGAAT TTTATAACTA ATAATCATTT GTTTTTAAGC 
TTGCTACAGC ATTTTGTGGT CGATGGT 

Retrieve as FASTA