Entry information : HaPrx16 (HanXRQChr14g0448801)
Entry ID 1486
Creation 2007-09-06 (Christophe Dunand)
Last sequence changes 2016-04-27 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaPrx16 (HanXRQChr14g0448801)
Name (synonym) HaPrx16 (HanXRQChr14g0448801)
Class Class III peroxidase    [Orthogroup: Prx003]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type Protoplasts
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaPrx16
start..stop
S start..stop
HaPrx19 543 0 12..331 10..327
LsPrx28 520 0 6..289 3..285
LperPrx28 516 0 6..288 1..282
LsaPrx28 515 0 6..289 3..285
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 135642294..135643289 996  
complement(join(135642294..135643289))


exon

Literature and cross-references HaPrx16 (HanXRQChr14g0448801)
Literature Kozik,A., et al., Lettuce and Sunflower ESTs from the Compositae Genome Project
DNA ref. HanXRQ genome:   HanXRQChr14 (135643289..135642294)
Cluster/Prediction ref. HanXRQ:   HanXRQChr14g0448801 UniGene:   Han.2345
Protein sequence: HaPrx16 (HanXRQChr14g0448801)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   332 (304)
PWM (Da):   %s   36901.8 (33803.1)  
PI (pH):   %s   9.5 (9.50) Peptide Signal:   %s   cut: 28 range:28-331
Sequence
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Send to Peroxiscan
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MAMQQVLIKP LILTLLCISL ILQPSHSQQL STSFYHKSCP RFEQIIQDTT TNKQIASPTT AGAALRLFFH DCLVEGCDAS VLISSTPFNK AERDADINLS LPGDGFDVVV RAKTALELAC  PGVVSCADIL AVATRNLVTM MGGPFYNVKL GRRDGLVSRA SRAQNILPKP TMSMNRIIRL FKSIGFSVQE MVALTGAHTI GFSHCSEISS DIYNYNNSSR FDPSYNPRYA MGLRNACADY 
RKNPSLSVFN DIMTPRDFDN SYYKNLPKGL GVLRSDRALV MDRRTRPFVE LYARDQKAFF EAFGRAIEKL SLYGVKTGRN GEIRRRCDSF N* 

Retrieve as FASTA  
Remarks Complete sequence from genomic and 3 EST +1 EST (BQ968573).
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGATGC AGCAGGTGCT AATAAAACCA CTCATTCTAA CCCTCTTGTG CATCTCACTC ATCTTACAAC CTTCACATTC TCAGCAGCTT TCCACATCAT TCTACCACAA ATCATGCCCC  AGATTCGAAC AAATAATCCA AGACACCACC ACCAACAAAC AAATCGCCTC CCCCACCACC GCCGGCGCCG CCCTCCGCCT CTTCTTCCAC GACTGTCTCG TCGAAGGCTG CGACGCTTCC  GTCCTCATCT CCTCCACCCC CTTCAACAAA GCCGAGCGTG ATGCCGACAT CAATCTCTCT CTCCCAGGTG ACGGTTTCGA CGTCGTCGTA CGCGCCAAAA CCGCCCTCGA ACTCGCTTGT  CCCGGTGTCG TCTCATGCGC TGACATCCTC GCTGTCGCCA CGCGCAACCT CGTCACCATG ATGGGTGGCC CCTTCTACAA CGTTAAACTT GGTCGGAGAG ATGGATTGGT TTCACGCGCC  TCACGCGCGC AAAACATTTT GCCCAAACCC ACAATGTCTA TGAACCGGAT CATAAGATTA TTTAAATCCA TAGGTTTTTC CGTACAGGAA ATGGTGGCCT TAACCGGGGC TCATACTATT  GGGTTCTCAC ATTGTAGTGA AATAAGTTCA GATATTTATA ATTACAATAA CTCCTCAAGG TTTGATCCGT CTTATAATCC TAGGTATGCT ATGGGATTAA GGAATGCGTG TGCGGATTAC  CGGAAGAATC CATCGTTGTC GGTTTTTAAT GATATAATGA CCCCGAGGGA CTTTGATAAC TCGTATTATA AGAATTTGCC CAAAGGGTTG GGTGTTTTGA GGTCGGATAG GGCGCTTGTT  ATGGATCGAC GGACAAGGCC GTTTGTGGAG TTGTATGCGC GAGATCAGAA GGCGTTCTTT GAGGCGTTTG GTCGAGCGAT TGAGAAGTTG AGTTTGTATG GTGTGAAGAC TGGGAGGAAT 
GGAGAGATTC GGCGTAGATG TGACTCGTTT AATTAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGATGC AGCAGGTGCT AATAAAACCA CTCATTCTAA CCCTCTTGTG CATCTCACTC ATCTTACAAC CTTCACATTC TCAGCAGCTT TCCACATCAT TCTACCACAA ATCATGCCCC  AGATTCGAAC AAATAATCCA AGACACCACC ACCAACAAAC AAATCGCCTC CCCCACCACC GCCGGCGCCG CCCTCCGCCT CTTCTTCCAC GACTGTCTCG TCGAAGGCTG CGACGCTTCC  GTCCTCATCT CCTCCACCCC CTTCAACAAA GCCGAGCGTG ATGCCGACAT CAATCTCTCT CTCCCAGGTG ACGGTTTCGA CGTCGTCGTA CGCGCCAAAA CCGCCCTCGA ACTCGCTTGT  CCCGGTGTCG TCTCATGCGC TGACATCCTC GCTGTCGCCA CGCGCAACCT CGTCACCATG ATGGGTGGCC CCTTCTACAA CGTTAAACTT GGTCGGAGAG ATGGATTGGT TTCACGCGCC  TCACGCGCGC AAAACATTTT GCCCAAACCC ACAATGTCTA TGAACCGGAT CATAAGATTA TTTAAATCCA TAGGTTTTTC CGTACAGGAA ATGGTGGCCT TAACCGGGGC TCATACTATT  GGGTTCTCAC ATTGTAGTGA AATAAGTTCA GATATTTATA ATTACAATAA CTCCTCAAGG TTTGATCCGT CTTATAATCC TAGGTATGCT ATGGGATTAA GGAATGCGTG TGCGGATTAC  CGGAAGAATC CATCGTTGTC GGTTTTTAAT GATATAATGA CCCCGAGGGA CTTTGATAAC TCGTATTATA AGAATTTGCC CAAAGGGTTG GGTGTTTTGA GGTCGGATAG GGCGCTTGTT  ATGGATCGAC GGACAAGGCC GTTTGTGGAG TTGTATGCGC GAGATCAGAA GGCGTTCTTT GAGGCGTTTG GTCGAGCGAT TGAGAAGTTG AGTTTGTATG GTGTGAAGAC TGGGAGGAAT 
GGAGAGATTC GGCGTAGATG TGACTCGTTT AATTAA 

Retrieve as FASTA