Entry information : CagraPrx17 (Cagra.2418s0013)
Entry ID 14863
Creation 2018-03-01 (Christophe Dunand)
Last sequence changes 2018-03-01 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2018-03-02 (Christophe Dunand)
Peroxidase information: CagraPrx17 (Cagra.2418s0013)
Name (synonym) CagraPrx17 (Cagra.2418s0013)
Class Class III peroxidase     [Orthogroup: Prx007]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Capsella
Organism Capsella grandiflora    [TaxId: 264402 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CagraPrx17
start..stop
S start..stop
CrubPrx12 556 0 1..269 90..358
AhalPrx49 538 0 1..269 90..358
BstrPrx46 535 0 1..269 90..360
AtPrx12 535 0 1..269 90..358
Literature and cross-references CagraPrx17 (Cagra.2418s0013)
Protein sequence: CagraPrx17 (Cagra.2418s0013)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   269
PWM (Da):   %s   29124.51  
PI (pH):   %s   4.87
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GCEASVLLAG SASGPGEQSS IPNLTLRQQA FVVIDNLRAL VQKRCGQVVS CSDVLALAAR DSVVLSGGPD YAVPLGRRDS LAFASQETTL NNLPPPFANA SQLIADFANR NLNITDLVAL  SGGHTIGIAH CPSFTDRLYP NQDPTMNKAF ANNLKRTCPT ANSSNTQVND IRSPDVFDNK YYVDLMNRQG LFTSDQDLFV DKRTRGIVES YAIDQQLFFD HFTVAMIKMG QMSVLTGTQG 
EIRSNCSARN TPSFMSVLEE GIEEAISII* 

Retrieve as FASTA  
Remarks Partial sequence from genomic. 5'end is missing due to N in the sequence.
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GGATGTGAAG CATCAGTGCT GCTAGCTGGA TCAGCTAGTG GACCAGGAGA ACAATCATCG ATCCCGAACC TGACGCTCCG TCAACAAGCC TTTGTCGTCA TCGATAATCT TCGTGCCCTT  GTCCAGAAAA GGTGCGGCCA AGTCGTCTCT TGCTCTGACG TCCTCGCTCT CGCCGCTCGC GACTCCGTCG TCCTTGTAAC CAACTCTCTC TCTTTTCTTT CCATAACTCA ATCACATTGG  TTTCAACTTA ATACTCGCGG TCACGCTAAT ACAAACTATA TATTAGACTA CAAGTCTCAC TAATTCTAAT TGATAGTTTT TTCTTTTGGG TGTGTCAATG TAGTCAGGAG GGCCAGACTA  TGCTGTGCCA CTTGGGCGAC GCGACTCACT AGCGTTCGCG AGCCAGGAGA CCACATTAAA TAACTTACCA CCACCCTTCG CCAACGCGAG TCAGCTCATA GCCGACTTCG CCAACAGAAA  CCTTAACATA ACCGACTTAG TGGCACTTTC TGGTGGTCAC ACTATCGGAA TTGCGCATTG TCCTTCTTTC ACAGACCGAC TCTACCCGAA CCAAGACCCA ACCATGAACA AAGCCTTCGC  CAACAACCTC AAACGCACTT GTCCCACCGC GAACTCGAGC AACACCCAAG TGAATGACAT AAGGAGTCCT GACGTGTTCG ACAACAAGTA CTACGTTGAT CTCATGAACC GACAAGGGCT  ATTCACTTCC GACCAAGATC TTTTCGTAGA CAAGAGGACA CGTGGCATCG TGGAGAGTTA TGCGATCGAC CAGCAGCTGT TTTTCGATCA TTTCACGGTA GCGATGATCA AGATGGGTCA 
GATGAGTGTC TTGACGGGAA CACAAGGAGA GATTCGTTCC AACTGCTCAG CAAGAAACAC CCCAAGTTTC ATGTCCGTCT TGGAAGAAGG CATTGAGGAA GCTATTTCCA TTATATAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GGATGTGAAG CATCAGTGCT GCTAGCTGGA TCAGCTAGTG GACCAGGAGA ACAATCATCG ATCCCGAACC TGACGCTCCG TCAACAAGCC TTTGTCGTCA TCGATAATCT TCGTGCCCTT  GTCCAGAAAA GGTGCGGCCA AGTCGTCTCT TGCTCTGACG TCCTCGCTCT CGCCGCTCGC GACTCCGTCG TCCTTTCAGG AGGGCCAGAC TATGCTGTGC CACTTGGGCG ACGCGACTCA  CTAGCGTTCG CGAGCCAGGA GACCACATTA AATAACTTAC CACCACCCTT CGCCAACGCG AGTCAGCTCA TAGCCGACTT CGCCAACAGA AACCTTAACA TAACCGACTT AGTGGCACTT  TCTGGTGGTC ACACTATCGG AATTGCGCAT TGTCCTTCTT TCACAGACCG ACTCTACCCG AACCAAGACC CAACCATGAA CAAAGCCTTC GCCAACAACC TCAAACGCAC TTGTCCCACC  GCGAACTCGA GCAACACCCA AGTGAATGAC ATAAGGAGTC CTGACGTGTT CGACAACAAG TACTACGTTG ATCTCATGAA CCGACAAGGG CTATTCACTT CCGACCAAGA TCTTTTCGTA  GACAAGAGGA CACGTGGCAT CGTGGAGAGT TATGCGATCG ACCAGCAGCT GTTTTTCGAT CATTTCACGG TAGCGATGAT CAAGATGGGT CAGATGAGTG TCTTGACGGG AACACAAGGA 
GAGATTCGTT CCAACTGCTC AGCAAGAAAC ACCCCAAGTT TCATGTCCGT CTTGGAAGAA GGCATTGAGG AAGCTATTTC CATTATATAA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GGATGTGAAG CATCAGTGCT GCTAGCTGGA TCAGCTAGTG GACCAGGAGA ACAATCATCG ATCCCGAACC TGACGCTCCG TCAACAAGCC TTTGTCGTCA TCGATAATCT TCGTGCCCTT  GTCCAGAAAA GGTGCGGCCA AGTCGTCTCT TGCTCTGACG TCCTCGCTCT CGCCGCTCGC GACTCCGTCG TCCTTTCAGG AGGGCCAGAC TATGCTGTGC CACTTGGGCG ACGCGACTCA  CTAGCGTTCG CGAGCCAGGA GACCACATTA AATAACTTAC CACCACCCTT CGCCAACGCG AGTCAGCTCA TAGCCGACTT CGCCAACAGA AACCTTAACA TAACCGACTT AGTGGCACTT  TCTGGTGGTC ACACTATCGG AATTGCGCAT TGTCCTTCTT TCACAGACCG ACTCTACCCG AACCAAGACC CAACCATGAA CAAAGCCTTC GCCAACAACC TCAAACGCAC TTGTCCCACC  GCGAACTCGA GCAACACCCA AGTGAATGAC ATAAGGAGTC CTGACGTGTT CGACAACAAG TACTACGTTG ATCTCATGAA CCGACAAGGG CTATTCACTT CCGACCAAGA TCTTTTCGTA  GACAAGAGGA CACGTGGCAT CGTGGAGAGT TATGCGATCG ACCAGCAGCT GTTTTTCGAT CATTTCACGG TAGCGATGAT CAAGATGGGT CAGATGAGTG TCTTGACGGG AACACAAGGA 
GAGATTCGTT CCAACTGCTC AGCAAGAAAC ACCCCAAGTT TCATGTCCGT CTTGGAAGAA GGCATTGAGG AAGCTATTTC CATTATATAA 

Retrieve as FASTA