Entry information : CagraPrx33 (Cagra.1671s0146)
Entry ID 14879
Creation 2018-03-01 (Christophe Dunand)
Last sequence changes 2018-03-01 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2018-03-02 (Christophe Dunand)
Peroxidase information: CagraPrx33 (Cagra.1671s0146)
Name (synonym) CagraPrx33 (Cagra.1671s0146)
Class Class III peroxidase     [Orthogroup: Prx005]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Capsella
Organism Capsella grandiflora    [TaxId: 264402 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CagraPrx33
start..stop
S start..stop
CrubPrx108 582 0 1..284 41..324
BstrPrx78 540 0 2..284 42..322
BrPrx01-1Aa_other 489 9e-177 2..284 41..321
BoPrx01-1Ca_other 488 2e-176 2..284 41..321
Literature and cross-references CagraPrx33 (Cagra.1671s0146)
Protein sequence: CagraPrx33 (Cagra.1671s0146)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   284
PWM (Da):   %s   31674.5  
PI (pH):   %s   10.08
Sequence
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Send to Peroxiscan
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RIVRRVTEQY VSRKPSLAAA LLRIYFHDCF VRGCDGSILL KSPNNDAERN AIPNLSLRGY EVVDAAKSAL EKRCPGIVSC ADVLALVARD AVLVIRGPWW PVPLGRRDGR ISRVSDANAN  LPSPFANITT LKKNFADKGL NAKDLVVLSG AHTIGISTCA LVNRRIYNFT GRGDFDPSMN PSYVRTLKKR CKPNDFKSIV DMDPGSVKRF DSHYFNVVAQ KKGLFTSDST LLDDFETRHY 
VEIQALTNGI SFNRDFSESM FKLGFVEILT GRNGEIRRKC AFVN* 

Retrieve as FASTA  
Remarks Partial sequence from genomic. 5'end is missing due to N in the sequence.
DNA
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CGCATTGTCC GCCGTGTCAC AGAACAATAT GTTTCTCGCA AACCAAGCCT CGCCGCTGCG CTTTTAAGGA TATATTTTCA TGACTGTTTC GTCAGAGTAA GCTGGCTTCA CTTATTCTGC  GAGACTGTGA CAATAAAAAT ACATAAAACT AGTCCTAACT CTTTTTTGTT ACGATTCATG CAGGGATGTG ATGGCTCCAT TCTTCTCAAG TCTCCAAACA ATGATGCGGA AAGAAATGCA  ATTCCCAACC TGTCCCTGAG AGGCTATGAA GTTGTTGATG CAGCCAAGTC AGCGCTCGAG AAGAGGTGTC CGGGTATCGT TTCTTGCGCT GATGTTCTTG CCTTGGTCGC CAGAGATGCA  GTCTTAGTGG TATAATATTT TCGCATTGGA CTGATTTTGT CATTCCAAAA ACCTATAAAG TACTTTAGTA TACAATTTCT TATTGTTGCC TTTTAACAGA TCAGGGGACC ATGGTGGCCA  GTTCCATTGG GGCGCAGGGA TGGACGCATC TCGAGAGTTT CCGACGCAAA CGCAAACTTA CCATCCCCTT TCGCCAACAT AACCACGTTG AAGAAGAACT TTGCTGACAA GGGTCTCAAC  GCTAAAGACC TTGTCGTTCT CTCAGGTAAA ACCTTAATAA GTGCAATATC AAAAGCTAGA AACTTGAAAG TTCAAAGCTG AATAAAAAAC TGGTTTCTGT TGAGCAGGGG CTCACACCAT  CGGGATCTCT ACTTGCGCTC TCGTCAACAG ACGTATATAC AACTTCACAG GCAGAGGCGA TTTTGACCCG TCGATGAACC CAAGCTACGT GAGGACATTG AAGAAAAGGT GCAAGCCCAA  TGATTTCAAA TCCATAGTTG ACATGGACCC AGGCAGTGTG AAGAGATTTG ACTCTCACTA CTTTAACGTG GTGGCTCAGA AGAAAGGGCT CTTCACATCT GACTCTACCC TTCTCGATGA  CTTTGAGACC AGACATTACG TTGAGATTCA GGCCTTGACT AATGGGATTT CTTTCAATAG AGATTTCTCA GAGTCGATGT TCAAACTTGG TTTTGTCGAA ATTCTCACAG GGAGAAACGG 
TGAGATCAGG AGGAAATGTG CTTTCGTTAA CTAA 

Retrieve as FASTA  
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CGCATTGTCC GCCGTGTCAC AGAACAATAT GTTTCTCGCA AACCAAGCCT CGCCGCTGCG CTTTTAAGGA TATATTTTCA TGACTGTTTC GTCAGAGGAT GTGATGGCTC CATTCTTCTC  AAGTCTCCAA ACAATGATGC GGAAAGAAAT GCAATTCCCA ACCTGTCCCT GAGAGGCTAT GAAGTTGTTG ATGCAGCCAA GTCAGCGCTC GAGAAGAGGT GTCCGGGTAT CGTTTCTTGC  GCTGATGTTC TTGCCTTGGT CGCCAGAGAT GCAGTCTTAG TGATCAGGGG ACCATGGTGG CCAGTTCCAT TGGGGCGCAG GGATGGACGC ATCTCGAGAG TTTCCGACGC AAACGCAAAC  TTACCATCCC CTTTCGCCAA CATAACCACG TTGAAGAAGA ACTTTGCTGA CAAGGGTCTC AACGCTAAAG ACCTTGTCGT TCTCTCAGGG GCTCACACCA TCGGGATCTC TACTTGCGCT  CTCGTCAACA GACGTATATA CAACTTCACA GGCAGAGGCG ATTTTGACCC GTCGATGAAC CCAAGCTACG TGAGGACATT GAAGAAAAGG TGCAAGCCCA ATGATTTCAA ATCCATAGTT  GACATGGACC CAGGCAGTGT GAAGAGATTT GACTCTCACT ACTTTAACGT GGTGGCTCAG AAGAAAGGGC TCTTCACATC TGACTCTACC CTTCTCGATG ACTTTGAGAC CAGACATTAC  GTTGAGATTC AGGCCTTGAC TAATGGGATT TCTTTCAATA GAGATTTCTC AGAGTCGATG TTCAAACTTG GTTTTGTCGA AATTCTCACA GGGAGAAACG GTGAGATCAG GAGGAAATGT 
GCTTTCGTTA ACTAA 

Retrieve as FASTA  
cDNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CGCATTGTCC GCCGTGTCAC AGAACAATAT GTTTCTCGCA AACCAAGCCT CGCCGCTGCG CTTTTAAGGA TATATTTTCA TGACTGTTTC GTCAGAGGAT GTGATGGCTC CATTCTTCTC  AAGTCTCCAA ACAATGATGC GGAAAGAAAT GCAATTCCCA ACCTGTCCCT GAGAGGCTAT GAAGTTGTTG ATGCAGCCAA GTCAGCGCTC GAGAAGAGGT GTCCGGGTAT CGTTTCTTGC  GCTGATGTTC TTGCCTTGGT CGCCAGAGAT GCAGTCTTAG TGATCAGGGG ACCATGGTGG CCAGTTCCAT TGGGGCGCAG GGATGGACGC ATCTCGAGAG TTTCCGACGC AAACGCAAAC  TTACCATCCC CTTTCGCCAA CATAACCACG TTGAAGAAGA ACTTTGCTGA CAAGGGTCTC AACGCTAAAG ACCTTGTCGT TCTCTCAGGG GCTCACACCA TCGGGATCTC TACTTGCGCT  CTCGTCAACA GACGTATATA CAACTTCACA GGCAGAGGCG ATTTTGACCC GTCGATGAAC CCAAGCTACG TGAGGACATT GAAGAAAAGG TGCAAGCCCA ATGATTTCAA ATCCATAGTT  GACATGGACC CAGGCAGTGT GAAGAGATTT GACTCTCACT ACTTTAACGT GGTGGCTCAG AAGAAAGGGC TCTTCACATC TGACTCTACC CTTCTCGATG ACTTTGAGAC CAGACATTAC  GTTGAGATTC AGGCCTTGAC TAATGGGATT TCTTTCAATA GAGATTTCTC AGAGTCGATG TTCAAACTTG GTTTTGTCGA AATTCTCACA GGGAGAAACG GTGAGATCAG GAGGAAATGT 
GCTTTCGTTA ACTAA 

Retrieve as FASTA