Entry information : CagraPrx58Cagra.3501s0042
Entry ID 14904
Creation 2018-03-01 (Christophe Dunand)
Last sequence changes 2018-03-01 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Peroxidase information: CagraPrx58Cagra.3501s0042
Name CagraPrx58Cagra.3501s0042
Class Class III peroxidase     [Orthogroup: Prx012]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Capsella
Organism Capsella grandiflora    [TaxId: 264402 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CagraPrx58
start..stop
S start..stop
CrubPrx62 642 0 1..316 1..316
BstrPrx77 615 0 1..316 1..316
AlyPrx04 602 0 1..316 1..316
AtPrx04 597 0 1..316 1..315
Literature and cross-references CagraPrx58Cagra.3501s0042
Protein sequence: CagraPrx58Cagra.3501s0042
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   316 (297)
PWM (Da):   %s   34225.01 (32002.8)  
PI (pH):   %s   7.64 (7.24) Peptide Signal:   %s   cut: 20 range:20-316
Sequence
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MTIFKILVLL LSLSCFSQAQ LSPTFYDQTC PNALSTIRSS IRTAISRERR MAASLIRLHF HDCFVNGCDA SIMLVATPNM ESERDSLANF QSARGFEVID QAKSTVESIC PGVVSCADII  AVAARDASEY VGGPRYAVKV GRRDSTAAFR AIADSGDLPS FSASLDTLSE LFLRKGLNTR DLVALSGAHT LGQAQCFTFR DRLYDNSSDI DAGFSSTRKR RCPVNGGDTT GAPLDQVTPN 
SFDNNYYRNL MQKKGLLASD QVLFGTGAST DSIVTEYSRN PSRFASDFAA AMIKMGDIQT LTGSDGQIRR ICSAVN* 

Retrieve as FASTA  
Remarks
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGACGATCT TCAAGATTCT TGTATTGTTA TTGAGTTTGT CTTGTTTCTC TCAAGCACAG CTTTCTCCTA CTTTCTACGA CCAAACTTGT CCAAACGCTC TCTCAACCAT CAGATCATCA  ATCCGAACCG CAATCAGCCG TGAGCGTAGA ATGGCTGCTT CTCTTATCCG TCTTCATTTC CACGACTGCT TCGTCAATGT ATGTAATTAA CATTTGATCC AACATGTACA TACATGTGTT  TCATGGACCG CTCTAAAATT TATGTTTATT TCTTGAAACT TTTTCGTAGG GTTGTGATGC ATCGATCATG CTCGTGGCAA CTCCTAACAT GGAGAGTGAG AGAGATTCAC TAGCAAATTT  TCAATCGGCA AGGGGGTTTG AAGTTATCGA TCAAGCCAAA TCCACTGTGG AGAGTATATG TCCCGGCGTT GTTTCTTGCG CTGATATTAT TGCCGTTGCC GCAAGAGACG CTTCTGAATA  CGTTAGTCTA TATCATCTTT ATAATGCATA CATCTTCAAA TATATTATCA TATCTTAAAC TACTATTTTG ACATATTTCC TAGAAATATT AGCATTTGTC GTATTACAGT ACGTACAACA  AACGATCATA GTTCTAATTA ATACTTAAAT ATCTAAATTT TGGTATCATC AATAGGTCGG AGGTCCAAGA TATGCGGTGA AGGTTGGTAG GAGAGATTCC ACCGCCGCGT TTAGAGCTAT  TGCAGACAGT GGCGATCTCC CCAGCTTCAG CGCAAGCCTC GACACACTCT CTGAACTCTT TCTTCGAAAA GGACTCAACA CTAGAGACCT CGTCGCTCTC TCAGGTTATT CACCCTAGAA  ATTACACTTT AATCCCTAGT TTCTTAGCGT TTAAGAACTT TCTTGTGACA CAAGTAAACC CTATCTACAG GAGCTCACAC CTTGGGGCAA GCTCAATGCT TCACGTTCAG GGATAGGCTT  TACGACAACT CGAGTGACAT CGACGCAGGA TTCTCCAGCA CACGTAAGCG TCGTTGTCCG GTCAACGGTG GAGATACGAC TGGAGCACCT CTAGATCAAG TGACACCAAA CTCGTTCGAC  AATAACTATT ACAGAAACTT GATGCAGAAG AAAGGTCTTT TGGCGAGCGA TCAAGTTTTG TTCGGAACCG GAGCTTCAAC AGACAGTATT GTGACGGAGT ACAGCAGAAA CCCATCTAGG 
TTCGCGTCTG ATTTTGCAGC TGCAATGATC AAAATGGGAG ATATTCAGAC ACTCACTGGT TCAGATGGAC AAATCCGAAG GATCTGCTCT GCTGTTAATT AA 

Retrieve as FASTA  
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGACGATCT TCAAGATTCT TGTATTGTTA TTGAGTTTGT CTTGTTTCTC TCAAGCACAG CTTTCTCCTA CTTTCTACGA CCAAACTTGT CCAAACGCTC TCTCAACCAT CAGATCATCA  ATCCGAACCG CAATCAGCCG TGAGCGTAGA ATGGCTGCTT CTCTTATCCG TCTTCATTTC CACGACTGCT TCGTCAATGG TTGTGATGCA TCGATCATGC TCGTGGCAAC TCCTAACATG  GAGAGTGAGA GAGATTCACT AGCAAATTTT CAATCGGCAA GGGGGTTTGA AGTTATCGAT CAAGCCAAAT CCACTGTGGA GAGTATATGT CCCGGCGTTG TTTCTTGCGC TGATATTATT  GCCGTTGCCG CAAGAGACGC TTCTGAATAC GTCGGAGGTC CAAGATATGC GGTGAAGGTT GGTAGGAGAG ATTCCACCGC CGCGTTTAGA GCTATTGCAG ACAGTGGCGA TCTCCCCAGC  TTCAGCGCAA GCCTCGACAC ACTCTCTGAA CTCTTTCTTC GAAAAGGACT CAACACTAGA GACCTCGTCG CTCTCTCAGG AGCTCACACC TTGGGGCAAG CTCAATGCTT CACGTTCAGG  GATAGGCTTT ACGACAACTC GAGTGACATC GACGCAGGAT TCTCCAGCAC ACGTAAGCGT CGTTGTCCGG TCAACGGTGG AGATACGACT GGAGCACCTC TAGATCAAGT GACACCAAAC  TCGTTCGACA ATAACTATTA CAGAAACTTG ATGCAGAAGA AAGGTCTTTT GGCGAGCGAT CAAGTTTTGT TCGGAACCGG AGCTTCAACA GACAGTATTG TGACGGAGTA CAGCAGAAAC 
CCATCTAGGT TCGCGTCTGA TTTTGCAGCT GCAATGATCA AAATGGGAGA TATTCAGACA CTCACTGGTT CAGATGGACA AATCCGAAGG ATCTGCTCTG CTGTTAATTA A 

Retrieve as FASTA  
cDNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGACGATCT TCAAGATTCT TGTATTGTTA TTGAGTTTGT CTTGTTTCTC TCAAGCACAG CTTTCTCCTA CTTTCTACGA CCAAACTTGT CCAAACGCTC TCTCAACCAT CAGATCATCA  ATCCGAACCG CAATCAGCCG TGAGCGTAGA ATGGCTGCTT CTCTTATCCG TCTTCATTTC CACGACTGCT TCGTCAATGG TTGTGATGCA TCGATCATGC TCGTGGCAAC TCCTAACATG  GAGAGTGAGA GAGATTCACT AGCAAATTTT CAATCGGCAA GGGGGTTTGA AGTTATCGAT CAAGCCAAAT CCACTGTGGA GAGTATATGT CCCGGCGTTG TTTCTTGCGC TGATATTATT  GCCGTTGCCG CAAGAGACGC TTCTGAATAC GTCGGAGGTC CAAGATATGC GGTGAAGGTT GGTAGGAGAG ATTCCACCGC CGCGTTTAGA GCTATTGCAG ACAGTGGCGA TCTCCCCAGC  TTCAGCGCAA GCCTCGACAC ACTCTCTGAA CTCTTTCTTC GAAAAGGACT CAACACTAGA GACCTCGTCG CTCTCTCAGG AGCTCACACC TTGGGGCAAG CTCAATGCTT CACGTTCAGG  GATAGGCTTT ACGACAACTC GAGTGACATC GACGCAGGAT TCTCCAGCAC ACGTAAGCGT CGTTGTCCGG TCAACGGTGG AGATACGACT GGAGCACCTC TAGATCAAGT GACACCAAAC  TCGTTCGACA ATAACTATTA CAGAAACTTG ATGCAGAAGA AAGGTCTTTT GGCGAGCGAT CAAGTTTTGT TCGGAACCGG AGCTTCAACA GACAGTATTG TGACGGAGTA CAGCAGAAAC 
CCATCTAGGT TCGCGTCTGA TTTTGCAGCT GCAATGATCA AAATGGGAGA TATTCAGACA CTCACTGGTT CAGATGGACA AATCCGAAGG ATCTGCTCTG CTGTTAATTA A 

Retrieve as FASTA