Entry information : CagraPrx78Cagra.1504s0038
Entry ID 14924
Creation 2018-03-01 (Christophe Dunand)
Last sequence changes 2018-03-01 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Peroxidase information: CagraPrx78Cagra.1504s0038
Name CagraPrx78Cagra.1504s0038
Class Class III peroxidase     [Orthogroup: Prx008]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Capsella
Organism Capsella grandiflora    [TaxId: 264402 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CagraPrx78
start..stop
S start..stop
CrubPrx50 653 0 1..324 1..324
BstrPrx47 616 0 1..324 1..324
AruPrx52 613 0 1..324 1..324
AlyPrx52 607 0 1..324 1..324
Literature and cross-references CagraPrx78Cagra.1504s0038
Protein sequence: CagraPrx78Cagra.1504s0038
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   324 (296)
PWM (Da):   %s   34199.12 (31068.3)  
PI (pH):   %s   8.76 (8.76) Peptide Signal:   %s   cut: 29 range:29-324
Sequence
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MVSKQLISIL VLVVTLLLQG NNNNLVEAQL TTNFYATSCP NLLSTVQAAV KSAVNSERRM GASILRLFFH DCFVNGCDGS ILLDDTSSFT GEQNANPNRN SARGFNVIDN IKSAVEKACP  GVVSCADILA IAARDSVVVL GGPNWNVKVG RRDARTASQA AANSNIPGPT SSLSQLISSF SAVGLSTRDM VALSGAHTIG QSRCTSFRAR IYNETNINAA FATTRQRTCP RATGSGDGNL 
APLDVTTAAS FDNNYFKNLV AQRGLLHSDQ VLFNGGSTDS IVRGYSSNPS SFSSDFTAAM IKMGDISPLT GSSGEIRKMC GRTN* 

Retrieve as FASTA  
Remarks
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ACACATACAA TAATCAACTC TAAGTCTTTT GCTTAACCTT ACCAACCATG GTTTCAAAAC AACTTATTTC CATTCTAGTT CTCGTTGTTA CACTTTTACT CCAAGGCAAT AACAATAACC  TCGTCGAAGC ACAACTCACC ACTAATTTCT ACGCAACCTC TTGCCCGAAC CTCCTCTCCA CCGTCCAAGC CGCCGTTAAA TCTGCCGTTA ACAGCGAGCG TCGAATGGGT GCATCCATCC  TCCGTCTTTT CTTCCACGAT TGCTTCGTCA ACGTAAGGCT TTCTTTTACT CACATTTATT TTTGTATACC CTAGCTTGCA TCCCAAGAAA CTTAGCATAA TGCTTATTTC CTTCTAATCA  TATATAGTCA TAACTTACAT CTATAGGGAT GCGACGGTTC GATTCTACTG GATGACACTT CGAGCTTCAC GGGAGAACAA AACGCGAACC CTAACCGCAA TTCTGCTCGC GGGTTCAATG  TGATCGACAA CATCAAATCA GCGGTTGAGA AAGCATGTCC TGGGGTTGTG TCTTGTGCTG ATATCTTAGC CATTGCAGCT AGAGACTCCG TCGTAGTCGT AAGCTCCCCT ATGTCCTCTC  TTAGTCCGGT TTTGTTGGCA ATTTAAACCG GTCAAATTAA CAATATTCGT CGTCTTAATT TGTTGTCTTT GTTGAAGCTT GGAGGGCCGA ATTGGAATGT GAAAGTAGGA AGAAGAGATG  CAAGAACGGC GAGCCAAGCG GCCGCGAATA GTAACATTCC TGGACCGACT TCGAGTCTGA GCCAACTCAT TAGTAGTTTC AGTGCCGTTG GTCTCTCCAC CAGAGATATG GTTGCTCTCT  CCGGTTCGTT TCGTTTCTTT TCTCTTCTTA CCCCAATTCC TTTTTCGTTT TTATGCAACT ATTTGTTTCT AACGTTGTTT TCGCAATTAT TCTTAGAATA TCGATTACTA ATAGGTGTAC  TAAAATGTAC ATTGCCAAAT TTGGGGACAA GAAAATTAAA TTTAATAATC ACATAACATA ATATTGCTTA AAGTTTTGTC TGTCACCAAT TTGTTATATA AAAAAGGAAA ATAAGAAAAG  GTAAATATAT ATATATATAT ATATATATAT ATATATATAT ATATATATAT TTCAAAGGAC TATTAAGAGT CAAGCTATTC GACAGAAAAG TAAAATATAA TTTGATTGTG TTGTTTGATT  TTTGTCGACC CTTTTTTTTT GTTTCTTTGT GTTTCTAATT TCAACACATT TTTGTAACGC TCCACCGACT TTTTCTGTTC TTTTCCCAAA ATTACGTAAT CATATAAATT ACTGTTACGG  ACGCAACTCC GACATAGTAA TTCAAATGAT ACTTAATTAA CAGATAATTA AGTCAACTAT TAAACTAATC ATTCAAATTT TTGTTTACAG GCGCACACAC GATCGGACAA TCCCGTTGCA  CAAGCTTCCG AGCGAGAATC TACAACGAGA CAAACATCAA CGCAGCCTTC GCAACCACAC GTCAAAGAAC TTGCCCTCGA GCCACCGGCT CCGGCGACGG AAACCTAGCA CCACTCGACG  TCACCACGGC GGCTTCTTTC GACAACAACT ACTTCAAGAA TCTCGTGGCT CAAAGAGGTC TCCTCCATTC TGACCAGGTG CTCTTCAACG GTGGGTCTAC TGATTCCATA GTCCGTGGCT  ACAGCAGCAA CCCGTCGAGC TTTAGCTCCG ACTTCACGGC GGCGATGATC AAGATGGGTG ACATTAGCCC CTTGACTGGT AGTAGTGGTG AGATCAGGAA AATGTGCGGG AGGACCAACT  GATACAAACA GCTACACGTG TCTTTTTCCT ATTGGATGTT TTACCTTTTT TGTTATTTGA GTTGGTGTCT TGGTGAGAAT AAGATTTGAT CTTCCCAAAA AACATATCGA AGATCCCTTT 
TCAATGTTTT TTTTCCTTTT CCCTTTTCAT GTTTTGTGTT GAAGCAAGTG TGTATTTTCG C 

Retrieve as FASTA  
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGTTTCAA AACAACTTAT TTCCATTCTA GTTCTCGTTG TTACACTTTT ACTCCAAGGC AATAACAATA ACCTCGTCGA AGCACAACTC ACCACTAATT TCTACGCAAC CTCTTGCCCG  AACCTCCTCT CCACCGTCCA AGCCGCCGTT AAATCTGCCG TTAACAGCGA GCGTCGAATG GGTGCATCCA TCCTCCGTCT TTTCTTCCAC GATTGCTTCG TCAACGGATG CGACGGTTCG  ATTCTACTGG ATGACACTTC GAGCTTCACG GGAGAACAAA ACGCGAACCC TAACCGCAAT TCTGCTCGCG GGTTCAATGT GATCGACAAC ATCAAATCAG CGGTTGAGAA AGCATGTCCT  GGGGTTGTGT CTTGTGCTGA TATCTTAGCC ATTGCAGCTA GAGACTCCGT CGTAGTCCTT GGAGGGCCGA ATTGGAATGT GAAAGTAGGA AGAAGAGATG CAAGAACGGC GAGCCAAGCG  GCCGCGAATA GTAACATTCC TGGACCGACT TCGAGTCTGA GCCAACTCAT TAGTAGTTTC AGTGCCGTTG GTCTCTCCAC CAGAGATATG GTTGCTCTCT CCGGCGCACA CACGATCGGA  CAATCCCGTT GCACAAGCTT CCGAGCGAGA ATCTACAACG AGACAAACAT CAACGCAGCC TTCGCAACCA CACGTCAAAG AACTTGCCCT CGAGCCACCG GCTCCGGCGA CGGAAACCTA  GCACCACTCG ACGTCACCAC GGCGGCTTCT TTCGACAACA ACTACTTCAA GAATCTCGTG GCTCAAAGAG GTCTCCTCCA TTCTGACCAG GTGCTCTTCA ACGGTGGGTC TACTGATTCC  ATAGTCCGTG GCTACAGCAG CAACCCGTCG AGCTTTAGCT CCGACTTCAC GGCGGCGATG ATCAAGATGG GTGACATTAG CCCCTTGACT GGTAGTAGTG GTGAGATCAG GAAAATGTGC 
GGGAGGACCA ACTGA 

Retrieve as FASTA  
cDNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ACACATACAA TAATCAACTC TAAGTCTTTT GCTTAACCTT ACCAACCATG GTTTCAAAAC AACTTATTTC CATTCTAGTT CTCGTTGTTA CACTTTTACT CCAAGGCAAT AACAATAACC  TCGTCGAAGC ACAACTCACC ACTAATTTCT ACGCAACCTC TTGCCCGAAC CTCCTCTCCA CCGTCCAAGC CGCCGTTAAA TCTGCCGTTA ACAGCGAGCG TCGAATGGGT GCATCCATCC  TCCGTCTTTT CTTCCACGAT TGCTTCGTCA ACGGATGCGA CGGTTCGATT CTACTGGATG ACACTTCGAG CTTCACGGGA GAACAAAACG CGAACCCTAA CCGCAATTCT GCTCGCGGGT  TCAATGTGAT CGACAACATC AAATCAGCGG TTGAGAAAGC ATGTCCTGGG GTTGTGTCTT GTGCTGATAT CTTAGCCATT GCAGCTAGAG ACTCCGTCGT AGTCCTTGGA GGGCCGAATT  GGAATGTGAA AGTAGGAAGA AGAGATGCAA GAACGGCGAG CCAAGCGGCC GCGAATAGTA ACATTCCTGG ACCGACTTCG AGTCTGAGCC AACTCATTAG TAGTTTCAGT GCCGTTGGTC  TCTCCACCAG AGATATGGTT GCTCTCTCCG GCGCACACAC GATCGGACAA TCCCGTTGCA CAAGCTTCCG AGCGAGAATC TACAACGAGA CAAACATCAA CGCAGCCTTC GCAACCACAC  GTCAAAGAAC TTGCCCTCGA GCCACCGGCT CCGGCGACGG AAACCTAGCA CCACTCGACG TCACCACGGC GGCTTCTTTC GACAACAACT ACTTCAAGAA TCTCGTGGCT CAAAGAGGTC  TCCTCCATTC TGACCAGGTG CTCTTCAACG GTGGGTCTAC TGATTCCATA GTCCGTGGCT ACAGCAGCAA CCCGTCGAGC TTTAGCTCCG ACTTCACGGC GGCGATGATC AAGATGGGTG  ACATTAGCCC CTTGACTGGT AGTAGTGGTG AGATCAGGAA AATGTGCGGG AGGACCAACT GATACAAACA GCTACACGTG TCTTTTTCCT ATTGGATGTT TTACCTTTTT TGTTATTTGA  GTTGGTGTCT TGGTGAGAAT AAGATTTGAT CTTCCCAAAA AACATATCGA AGATCCCTTT TCAATGTTTT TTTTCCTTTT CCCTTTTCAT GTTTTGTGTT GAAGCAAGTG TGTATTTTCG 

Retrieve as FASTA