Entry information : BstrPrx[P]62-1 (Bostr.2983s0159)
Entry ID 14936
Creation 2018-03-02 (Christophe Dunand)
Last sequence changes 2018-03-07 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2018-03-07 (Christophe Dunand)
Peroxidase information: BstrPrx[P]62-1 (Bostr.2983s0159)
Name (synonym) BstrPrx[P]62-1 (Bostr.2983s0159)
Class Class III peroxidase     [Orthogroup: Prx005]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Boechera
Organism Boechera stricta    [TaxId: 72658 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BstrPrx[P]62-1
start..stop
S start..stop
BstrPrx31 339 1e-119 1..173 1..171
AalpPrx62 326 2e-114 1..173 1..171
BnPrx62-1_other 312 2e-110 1..173 1..171
CrubPrx82 314 1e-109 1..173 1..172
Literature and cross-references BstrPrx[P]62-1 (Bostr.2983s0159)
Protein sequence: BstrPrx[P]62-1 (Bostr.2983s0159)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   175 (151)
PWM (Da):   %s   18833.45 (16062.0)  
PI (pH):   %s   8.06 (6.91) Peptide Signal:   %s   cut: 25 range:25-175
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGLVRSFCSF IVLLTNRCLI AVYGQGTRIG FYSTTCPNAE TIVRNTVISH FGSDPKIAPG LLRMHFHDCF VQGCDGSVLL SGPNSERTAG ANFNLHGFEV IDDAKTQLEA ACPDVVSCAD 
ILTLAARDSV ALTKGQSWQV PTGRRDGRVS LATNVNNLPS PSDSVAIQQR KFARD* 

Retrieve as FASTA  
Remarks Pseudogene from genomic. Frame shift in the first exon last exon is missing
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGTTTGG TCCGATCATT TTGTTCATTC ATAGTCTTGC TTACAAATCG TTGTCTCATC GCGGTTTATG GCCAAGGTAC GAGGATCGGG TTCTATTCGA CCACGTGCCC CAATGCCGAG  ACGATTGTTC GGAACACCGT GATATCTCAC TTTGGTTCAG ATCCAAAATT GCACCCGGAT TATTGAGAAT GCATTTCCAT GATTGCTTCG TTCAAGGTTG TGATGGTTCA GTGCTTTTAT  CGGGACCTAA CTCTGAAAGA ACCGCTGGTG CTAACTTTAA CCTCCATGGT TTCGAGGTCA TTGACGACGC CAAGACGCAG CTAGAGGCGG CATGTCCTGA TGTTGTCTCT TGTGCTGATA  TTTTAACCTT GGCGGCTCGT GATTCCGTTG CCCTCGTAAG TATATATACT AATACAAATA TCATACATAA GCGAAGAACT ATGCCTCGAT TGTTTTAAAT GCCCAATATT TTGTGTTTGG  ATTTAGATAT GAGTAAGAAA AGAGGATTAA AAAAGCAACA CATTTTTTTT GTTTTATCAT TAAATAATTT TACAAGATAA TACGCCAAAA TACAAACAAT ATGTTTCTTC ATTAATTTCT  TTGTGTTGTG TTTACGTTTA CAATGAAATT TTTACCAAAA GTTGTAGTAG ATTCATCCTA CATATGTTAC AAAACTTTGA TATTTAAAAA GTTATATATA TTTGAAAAAG AGTTTTTTTT  TAAAACATAT ATAATAGTAG ATTTTAAAGA ATTTCTAAGC AACATTTAAG TTTTATTTTA TGTGGTTACC TATATGATAT TAAACTAGGT AATCTCCCGC GTTATACGTG GGATAAAATA  TTCATAATAT TTTTTAGAAA ATTTATAAAT TAAATAAAAA TTTCTAAATA TATTATTGTA TAAATTGTTG AAATCTATAA TTTAGAAAAC AATAAAATTT AGTTACAATT TTATGGAATA  TTTACTTACT TGATTTTCCA TAAATACATA AATCTAATTT ATGTAAGATT ATATTCTTCC ATGACTTAAT TAAATGATTA CACAATAACT AATGACTAAA ATACACTTAA TGAGAAATTA  AAATTTGTTT TTTGATGTAA TGACAATGTT ATGTAAATAT TTACACTTTT AATGTTTATT TATAAGTGTA CTCCCCAAAT AATATATAGG AGATTGGTAT TGGTTACAAA GAAAGTAAAA  ACAAAAATAA TGTAGAACAA ATGAAACGAC GGAGAGTAAT TAACGTTTGC GTGGCTTTGC ATGGTGCATT TAGACGAAAG GACAAAGTTG GCAAGTTCCA ACAGGACGTA GGGATGGACG 
AGTATCCTTG GCAACGAACG TTAACAATCT TCCTTCTCCA AGTGACTCCG TAGCCATTCA ACAAAGAAAA TTCGCTAGGG ATTAG 

Retrieve as FASTA