Entry information : CrubPrx108Carubv10012469m.g
Entry ID 15022
Creation 2018-03-08 (Christophe Dunand)
Last sequence changes 2018-03-08 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Peroxidase information: CrubPrx108Carubv10012469m.g
Name CrubPrx108Carubv10012469m.g
Class Class III peroxidase    [Orthogroup: Prx004]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Capsella
Organism Capsella rubella    [TaxId: 81985 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CrubPrx108
start..stop
S start..stop
CagraPrx33 582 0 41..324 1..284
BstrPrx78 575 0 1..324 1..322
BrPrx01-1Aa_other 541 0 1..324 1..321
CrubPrx51 532 0 1..324 1..320
Literature and cross-references CrubPrx108Carubv10012469m.g
Protein sequence: CrubPrx108Carubv10012469m.g
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   324 (303)
PWM (Da):   %s   36134.93 (33928.6) Transmb domain:   %s   i5-22o
PI (pH):   %s   9.96 (9.88) Peptide Signal:   %s   cut: 22 range:22-324
Sequence
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MATKNLLALV VLLSVLGVSV AIPRFRLDLD YYRSKCPDTE RIVRRVTEQY VSRKPSLAAA LLRIYFHDCF VRGCDGSILL KSPNNDAERN AIPNLSLRGY EVVDAAKSAL EKRCPGIVSC  ADVLALVARD AVLVIRGPWW PVPLGRRDGR ISRVSDANAN LPSPFANITT LKKNFADKGL NAKDLVVLSG AHTIGISTCA LVNRRIYNFT GRGDFDPSMN PSYVRTLKKR CKPNDFKSIV 
DMDPGSVKRF DSHYFNVVAQ KKGLFTSDST LLDDFETRHY VEIQALTNGI SFNRDFSESM FKLGFVEILT GRNGEIRRKC AFVN* 

Retrieve as FASTA  
Remarks
DNA
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ATGGCGACCA AAAACCTTCT CGCCCTTGTG GTTCTTCTTA GCGTCCTTGG AGTCTCTGTT GCCATTCCAA GGTTTAGGCT TGACCTCGAC TACTACCGGT CTAAGTGTCC GGACACAGAG  CGCATTGTCC GCCGTGTCAC AGAACAATAT GTTTCTCGCA AACCAAGCCT CGCCGCTGCG CTTTTAAGGA TATATTTTCA TGACTGTTTC GTCAGAGTAA GCTAGCTTCA CTTATTCTGC  AAGACTGTGA CAATAAATAC ATAAAACTAG TCCTAACTCT TTTTTTTTTA CGATTCATGC AGGGATGTGA TGGCTCCATT CTTCTCAAGT CTCCAAACAA TGATGCGGAA AGAAATGCAA  TTCCCAACCT GTCCCTGAGA GGCTATGAAG TTGTTGATGC AGCCAAGTCA GCGCTCGAGA AGAGGTGTCC GGGTATCGTT TCTTGCGCTG ATGTTCTTGC CTTGGTCGCC AGAGATGCAG  TCTTAGTGGT ATAATATTTT CTCATTGGAC TGATTTTGTC ATTCCAAAAA CCTATAAAGT ACTTTAGTAT ACAATTTCTT ATTGTTGCCT TTTAACAGAT CAGGGGACCA TGGTGGCCAG  TTCCATTGGG GCGCAGGGAT GGACGCATCT CGAGAGTTTC CGACGCAAAC GCAAACTTAC CATCCCCTTT CGCCAACATA ACCACGTTGA AGAAGAACTT TGCTGACAAG GGTCTCAACG  CTAAAGACCT TGTCGTTCTC TCAGGTACTT ATCTACAGTA AAACCTTAAT AAGTGCAATA TCAAAAGCTA GAAACTTGAA AGTTCAAAGC TGAATAAAAA CTGGTTTCTG TTGAGCAGGG  GCTCACACCA TCGGGATCTC TACTTGCGCT CTCGTCAACA GACGTATATA CAACTTCACA GGCAGAGGCG ATTTTGACCC GTCGATGAAC CCAAGCTACG TGAGGACATT GAAGAAAAGG  TGCAAGCCCA ATGATTTCAA ATCCATAGTG GACATGGACC CAGGCAGTGT GAAGAGATTT GACTCTCACT ACTTTAACGT GGTGGCTCAG AAGAAAGGGC TCTTCACATC TGACTCTACC  CTTCTCGATG ACTTTGAGAC CAGACATTAC GTTGAGATTC AGGCCTTGAC TAATGGGATT TCTTTCAATA GAGATTTCTC AGAGTCGATG TTCAAACTTG GTTTTGTCGA AATTCTCACA 
GGGAGAAACG GTGAGATCAG GAGGAAATGT GCTTTCGTTA ACTAA 

Retrieve as FASTA  
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCGACCA AAAACCTTCT CGCCCTTGTG GTTCTTCTTA GCGTCCTTGG AGTCTCTGTT GCCATTCCAA GGTTTAGGCT TGACCTCGAC TACTACCGGT CTAAGTGTCC GGACACAGAG  CGCATTGTCC GCCGTGTCAC AGAACAATAT GTTTCTCGCA AACCAAGCCT CGCCGCTGCG CTTTTAAGGA TATATTTTCA TGACTGTTTC GTCAGAGGAT GTGATGGCTC CATTCTTCTC  AAGTCTCCAA ACAATGATGC GGAAAGAAAT GCAATTCCCA ACCTGTCCCT GAGAGGCTAT GAAGTTGTTG ATGCAGCCAA GTCAGCGCTC GAGAAGAGGT GTCCGGGTAT CGTTTCTTGC  GCTGATGTTC TTGCCTTGGT CGCCAGAGAT GCAGTCTTAG TGATCAGGGG ACCATGGTGG CCAGTTCCAT TGGGGCGCAG GGATGGACGC ATCTCGAGAG TTTCCGACGC AAACGCAAAC  TTACCATCCC CTTTCGCCAA CATAACCACG TTGAAGAAGA ACTTTGCTGA CAAGGGTCTC AACGCTAAAG ACCTTGTCGT TCTCTCAGGG GCTCACACCA TCGGGATCTC TACTTGCGCT  CTCGTCAACA GACGTATATA CAACTTCACA GGCAGAGGCG ATTTTGACCC GTCGATGAAC CCAAGCTACG TGAGGACATT GAAGAAAAGG TGCAAGCCCA ATGATTTCAA ATCCATAGTG  GACATGGACC CAGGCAGTGT GAAGAGATTT GACTCTCACT ACTTTAACGT GGTGGCTCAG AAGAAAGGGC TCTTCACATC TGACTCTACC CTTCTCGATG ACTTTGAGAC CAGACATTAC  GTTGAGATTC AGGCCTTGAC TAATGGGATT TCTTTCAATA GAGATTTCTC AGAGTCGATG TTCAAACTTG GTTTTGTCGA AATTCTCACA GGGAGAAACG GTGAGATCAG GAGGAAATGT 
GCTTTCGTTA ACTAA 

Retrieve as FASTA  
cDNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCGACCA AAAACCTTCT CGCCCTTGTG GTTCTTCTTA GCGTCCTTGG AGTCTCTGTT GCCATTCCAA GGTTTAGGCT TGACCTCGAC TACTACCGGT CTAAGTGTCC GGACACAGAG  CGCATTGTCC GCCGTGTCAC AGAACAATAT GTTTCTCGCA AACCAAGCCT CGCCGCTGCG CTTTTAAGGA TATATTTTCA TGACTGTTTC GTCAGAGGAT GTGATGGCTC CATTCTTCTC  AAGTCTCCAA ACAATGATGC GGAAAGAAAT GCAATTCCCA ACCTGTCCCT GAGAGGCTAT GAAGTTGTTG ATGCAGCCAA GTCAGCGCTC GAGAAGAGGT GTCCGGGTAT CGTTTCTTGC  GCTGATGTTC TTGCCTTGGT CGCCAGAGAT GCAGTCTTAG TGATCAGGGG ACCATGGTGG CCAGTTCCAT TGGGGCGCAG GGATGGACGC ATCTCGAGAG TTTCCGACGC AAACGCAAAC  TTACCATCCC CTTTCGCCAA CATAACCACG TTGAAGAAGA ACTTTGCTGA CAAGGGTCTC AACGCTAAAG ACCTTGTCGT TCTCTCAGGG GCTCACACCA TCGGGATCTC TACTTGCGCT  CTCGTCAACA GACGTATATA CAACTTCACA GGCAGAGGCG ATTTTGACCC GTCGATGAAC CCAAGCTACG TGAGGACATT GAAGAAAAGG TGCAAGCCCA ATGATTTCAA ATCCATAGTG  GACATGGACC CAGGCAGTGT GAAGAGATTT GACTCTCACT ACTTTAACGT GGTGGCTCAG AAGAAAGGGC TCTTCACATC TGACTCTACC CTTCTCGATG ACTTTGAGAC CAGACATTAC  GTTGAGATTC AGGCCTTGAC TAATGGGATT TCTTTCAATA GAGATTTCTC AGAGTCGATG TTCAAACTTG GTTTTGTCGA AATTCTCACA GGGAGAAACG GTGAGATCAG GAGGAAATGT 
GCTTTCGTTA ACTAA 

Retrieve as FASTA