Entry information : MpCSD01 (Mapoly0007s0275)
Entry ID 15113
Creation 2018-04-12 (Christophe Dunand)
Last sequence changes 2018-04-12 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2018-04-24 (Christophe Dunand)
Peroxidase information: MpCSD01 (Mapoly0007s0275)
Name (synonym) MpCSD01 (Mapoly0007s0275)
Class Cu/Zn SOD    [Orthogroup: CSD001]
Taxonomy Eukaryota Viridiplantae Streptophyta Marchantiaceae Marchantia
Organism Marchantia polymorpha    [TaxId: 3197 ]
Cellular localisation N/D
Tissue types Reproductive organs
Thallus
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value MpCSD01
start..stop
S start..stop
PpaCSD04 267 4e-93 1..156 49..203
PpaCSD03 265 5e-92 1..156 51..205
LeCSD03 249 1e-85 1..156 62..216
HaCSD04 246 1e-84 1..156 70..224
Literature and cross-references MpCSD01 (Mapoly0007s0275)
Protein sequence: MpCSD01 (Mapoly0007s0275)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   161
PWM (Da):   %s   16365.24  
PI (pH):   %s   6.06
Sequence
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Send to Peroxiscan
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MAVTKKAVAV LKGNSPDVTG TVVLMQEDDG PTQVSVKISG LAPGKHGFHL HEFGDTTNGC MSTGPHFNPQ KKTHGAPEDE VRHAGDLGNV IAGPDGKVEV TITDAQIPLS GPQSVVGRAF 
VVHEAEDDLG KGGHELSLST GNAGGRLACG VVGLTPASTP L* 

Retrieve as FASTA  
Remarks 7 ESTs
DNA
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ATGTGAAGGA AGCCGCGCTC GAGTAGCCTG CACAATCTTT GCGTTGTCTG CCTCCTTCTT TCTTTGTTTG CTGCTGCTGC TGTTGTTGCT GCTGCCTGCG CTCGAGGTGG TTTAGGATCG  TCGTACGTCG ATCGGACGAG AAGCGCAAGC AAGGCTGTTC GAACAAGATG GCCGTGACCA AGAAGGCCGT GGCTGTACTG AAGGGAAATA GCCCCGATGT GACCGGCACA GTTGTGCTGA  TGCAAGAGGA TGATGGTCCC ACTCAGGTTT CCGTCAAGAT TTCAGGGCTC GCTCCTGGGA AGCACGGATT CCATTTGCAC GAGTTCGGCG ACACCACCAA TGGGTGCATG TCGACGGGGC  CGCACTTCAA TCCGCAGAAG AAGACCCACG GCGCTCCCGA GGATGAGGTG CGCCACGCTG GAGACCTGGG CAACGTTATC GCCGGCCCCG ATGGCAAGGT CGAGGTGACG ATCACGGATG  CGCAGATTCC TCTCTCAGGA CCCCAATCGG TCGTCGGCAG AGCCTTCGTC GTCCATGAAG CGGAGGATGA CCTTGGAAAG GGTGGGCACG AGCTCAGTTT GTCGACTGGA AATGCTGGAG  GCCGTCTTGC CTGTGGTGTC GTCGGATTGA CCCCTGCTTC CACTCCCCTG TAATTGTGGC GAACATAGTC ACCCGGTACG TGCTATTGTG CTAGCCGATG TCCGGGGATC ACTCTTGGTC  GCTGTGTTTT CAATTGGGAA CGATCTTTAT CGGACATTTG AGTGCCATCC CATCAATGTA AGAAATTGAC CTCGTTATAT ACAAAGTGAA AAGTCCGTGT TGTAAGATTG TGTCATCGTT  TTCTGCTCCT CTTTTAGAGG TTTATCAATA TGATGTGTCT GGGTTGCACG GATAAGGCTT CAATTGTTTC ATGGTTGTCA AAGAGCGTCT GCTGCACTAG AGGAGGATTT CTCCTTTCGC  TGCTGTCATT CTTCCTCCAA GCGTCGACTT GTTGGGCTTT CACACTTGTC TCTTGTCATG AGGGAACTTT CCGCACGATT TTGCGGCTCG GAATTTCTGC ACCTTCAGCC CGCTATCTAA  GATTTTGGTC GATGCATGAA TTCTTCACTT TTCGATTTGC AGTGTATGGT GTCTGAAATG TCTTGATAAC ATTCGCCACT TTTGTCAATG TCTTATCTCC TTAGTAAAAG AAAGGATAAG 
GGTTGTACAC CCGAGGTTGC CTTCAATGGT TACCTATGTT AGGTCTCAAT TATGTAGG 

Retrieve as FASTA  
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCCGTGA CCAAGAAGGC CGTGGCTGTA CTGAAGGGAA ATAGCCCCGA TGTGACCGGC ACAGTTGTGC TGATGCAAGA GGATGATGGT CCCACTCAGG TTTCCGTCAA GATTTCAGGG  CTCGCTCCTG GGAAGCACGG ATTCCATTTG CACGAGTTCG GCGACACCAC CAATGGGTGC ATGTCGACGG GGCCGCACTT CAATCCGCAG AAGAAGACCC ACGGCGCTCC CGAGGATGAG  GTGCGCCACG CTGGAGACCT GGGCAACGTT ATCGCCGGCC CCGATGGCAA GGTCGAGGTG ACGATCACGG ATGCGCAGAT TCCTCTCTCA GGACCCCAAT CGGTCGTCGG CAGAGCCTTC  GTCGTCCATG AAGCGGAGGA TGACCTTGGA AAGGGTGGGC ACGAGCTCAG TTTGTCGACT GGAAATGCTG GAGGCCGTCT TGCCTGTGGT GTCGTCGGAT TGACCCCTGC TTCCACTCCC 
CTGTAA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGTGAAGGA AGCCGCGCTC GAGTAGCCTG CACAATCTTT GCGTTGTCTG CCTCCTTCTT TCTTTGTTTG CTGCTGCTGC TGTTGTTGCT GCTGCCTGCG CTCGAGGTGG TTTAGGATCG  TCGTACGTCG ATCGGACGAG AAGCGCAAGC AAGGCTGTTC GAACAAGATG GCCGTGACCA AGAAGGCCGT GGCTGTACTG AAGGGAAATA GCCCCGATGT GACCGGCACA GTTGTGCTGA  TGCAAGAGGA TGATGGTCCC ACTCAGGTTT CCGTCAAGAT TTCAGGGCTC GCTCCTGGGA AGCACGGATT CCATTTGCAC GAGTTCGGCG ACACCACCAA TGGGTGCATG TCGACGGGGC  CGCACTTCAA TCCGCAGAAG AAGACCCACG GCGCTCCCGA GGATGAGGTG CGCCACGCTG GAGACCTGGG CAACGTTATC GCCGGCCCCG ATGGCAAGGT CGAGGTGACG ATCACGGATG  CGCAGATTCC TCTCTCAGGA CCCCAATCGG TCGTCGGCAG AGCCTTCGTC GTCCATGAAG CGGAGGATGA CCTTGGAAAG GGTGGGCACG AGCTCAGTTT GTCGACTGGA AATGCTGGAG  GCCGTCTTGC CTGTGGTGTC GTCGGATTGA CCCCTGCTTC CACTCCCCTG TAATTGTGGC GAACATAGTC ACCCGGTACG TGCTATTGTG CTAGCCGATG TCCGGGGATC ACTCTTGGTC  GCTGTGTTTT CAATTGGGAA CGATCTTTAT CGGACATTTG AGTGCCATCC CATCAATGTA AGAAATTGAC CTCGTTATAT ACAAAGTGAA AAGTCCGTGT TGTAAGATTG TGTCATCGTT  TTCTGCTCCT CTTTTAGAGG TTTATCAATA TGATGTGTCT GGGTTGCACG GATAAGGCTT CAATTGTTTC ATGGTTGTCA AAGAGCGTCT GCTGCACTAG AGGAGGATTT CTCCTTTCGC  TGCTGTCATT CTTCCTCCAA GCGTCGACTT GTTGGGCTTT CACACTTGTC TCTTGTCATG AGGGAACTTT CCGCACGATT TTGCGGCTCG GAATTTCTGC ACCTTCAGCC CGCTATCTAA  GATTTTGGTC GATGCATGAA TTCTTCACTT TTCGATTTGC AGTGTATGGT GTCTGAAATG TCTTGATAAC ATTCGCCACT TTTGTCAATG TCTTATCTCC TTAGTAAAAG AAAGGATAAG 
GGTTGTACAC CCGAGGTTGC CTTCAATGGT TACCTATGTT AGGTCTCAAT TATGTAGG 

Retrieve as FASTA