Entry information : PtaPrx42
Entry ID 15178
Creation 2018-04-25 (Christophe Dunand)
Last sequence changes 2018-04-25 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2018-04-25 (Christophe Dunand)
Peroxidase information: PtaPrx42
Name PtaPrx42
Class Class III peroxidase    [Orthogroup: Prx004]
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Pinus
Organism Pinus taeda (loblolly pine)    [TaxId: 3352 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PtaPrx42
start..stop
S start..stop
PabPrx02 640 0 3..353 1..353
CjPrx02 505 0 3..348 1..348
GbPrx03 468 7e-167 31..346 35..353
CmichPrx07 457 1e-162 7..350 10..354
Literature and cross-references PtaPrx42
EST ref. GenBank:   CF386338.1 [5' end]   DR097295.1 [3' end]
Protein sequence: PtaPrx42
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   353 (335)
PWM (Da):   %s   38676.6 (36567.5)  
PI (pH):   %s   7.85 (7.99) Peptide Signal:   %s   cut: 19 range:19-353
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MSMEKLVILC LLCTLCIAYA IRDNVLTLNA DPPLVNGLSW TFYQKSCPQL ESIVKQRIDF YLKQDITQAA GLLRLHFHDC FVQGCDGSVL LDGSASGPSE QGAPPNLSLR KKAFEIINDI  KSHVDTACGF VVSCADVTAL AAKESIRAAG GPQYRVPLGR RDSLKFATQN VTVANLPAPS FKVTALINAF ASKNLNVTDL VALSGGHTIG MGHCTSFTDR LYPTQDTSLN KSFAQRLYTK 
CPSKTSTNTT VLDIRTPNVF DNKYYVDLMN REGLFTSDQD LYTDSRTKAI VKEFALNQDL FFRNFAVAMV KMSQLNVLTG SKGEIRHNCS ASNLASTIQV AVEDVIESYA SFM* 

Retrieve as FASTA  
Remarks
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGAGTATGG AGAAGCTGGT GATTCTTTGT TTGTTATGCA CTCTCTGTAT CGCTTATGCC ATAAGAGATA ATGTCCTCAC TCTCAATGCC GATCCGCCCC TTGTAAACGG GTTGTCATGG  ACATTTTATC AGAAGAGCTG TCCTCAGTTG GAATCCATTG TAAAGCAAAG GATTGATTTC TACCTCAAGC AGGACATCAC CCAGGCAGCT GGGTTGCTGC GACTCCATTT CCACGACTGC  TTCGTTCAGG GTTGTGACGG ATCGGTTCTG TTGGACGGAT CAGCCAGTGG CCCCAGCGAA CAAGGGGCTC CGCCCAACTT ATCGCTGAGA AAGAAGGCGT TTGAAATAAT AAACGACATC  AAGAGCCACG TGGACACGGC TTGCGGCTTT GTTGTGTCCT GTGCTGACGT CACCGCTCTA GCGGCTAAAG AGTCGATCAG GGCGGCCGGA GGGCCACAGT ACCGTGTACC GCTGGGGCGC  AGGGACAGCC TGAAATTCGC CACACAAAAC GTGACCGTTG CCAACCTCCC GGCTCCCTCC TTTAAGGTGA CCGCGCTAAT CAATGCTTTT GCCTCCAAGA ATCTCAACGT CACAGACCTC  GTTGCTCTTT CAGGCGGACA CACCATCGGC ATGGGGCACT GCACCTCCTT TACCGACCGT CTATACCCGA CGCAGGACAC TAGTTTGAAC AAAAGCTTCG CCCAGAGGCT GTACACTAAG  TGTCCTTCCA AGACCTCCAC CAACACCACC GTGCTGGACA TCCGCACGCC CAACGTCTTC GACAACAAGT ATTACGTAGA CCTGATGAAC CGGGAGGGCC TGTTCACATC CGATCAGGAT  CTCTACACCG ACTCCCGCAC AAAAGCAATC GTGAAGGAGT TTGCCCTGAA TCAAGATCTT TTCTTCCGGA ACTTTGCAGT GGCCATGGTG AAGATGAGCC AGCTCAACGT GCTCACCGGA 
TCCAAAGGGG AGATCAGGCA TAACTGTTCC GCTAGCAATC TGGCTTCGAC GATCCAAGTG GCGGTAGAAG ACGTTATTGA ATCTTATGCG TCATTCATGT AA 

Retrieve as FASTA  
cDNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATTAATGAGT ATGGAGAAGC TGGTGATTCT TTGTTTGTTA TGCACTCTCT GTATCGCTTA TGCCATAAGA GATAATGTCC TCACTCTCAA TGCCGATCCG CCCCTTGTAA ACGGGTTGTC  ATGGACATTT TATCAGAAGA GCTGTCCTCA GTTGGAATCC ATTGTAAAGC AAAGGATTGA TTTCTACCTC AAGCAGGACA TCACCCAGGC AGCTGGGTTG CTGCGACTCC ATTTCCACGA  CTGCTTCGTT CAGGGTTGTG ACGGATCGGT TCTGTTGGAC GGATCAGCCA GTGGCCCCAG CGAACAAGGG GCTCCGCCCA ACTTATCGCT GAGAAAGAAG GCGTTTGAAA TAATAAACGA  CATCAAGAGC CACGTGGACA CGGCTTGCGG CTTTGTTGTG TCCTGTGCTG ACGTCACCGC TCTAGCGGCT AAAGAGTCGA TCAGGGCGGC CGGAGGGCCA CAGTACCGTG TACCGCTGGG  GCGCAGGGAC AGCCTGAAAT TCGCCACACA AAACGTGACC GTTGCCAACC TCCCGGCTCC CTCCTTTAAG GTGACCGCGC TAATCAATGC TTTTGCCTCC AAGAATCTCA ACGTCACAGA  CCTCGTTGCT CTTTCAGGCG GACACACCAT CGGCATGGGG CACTGCACCT CCTTTACCGA CCGTCTATAC CCGACGCAGG ACACTAGTTT GAACAAAAGC TTCGCCCAGA GGCTGTACAC  TAAGTGTCCT TCCAAGACCT CCACCAACAC CACCGTGCTG GACATCCGCA CGCCCAACGT CTTCGACAAC AAGTATTACG TAGACCTGAT GAACCGGGAG GGCCTGTTCA CATCCGATCA  GGATCTCTAC ACCGACTCCC GCACAAAAGC AATCGTGAAG GAGTTTGCCC TGAATCAAGA TCTTTTCTTC CGGAACTTTG CAGTGGCCAT GGTGAAGATG AGCCAGCTCA ACGTGCTCAC  CGGATCCAAA GGGGAGATCA GGCATAACTG TTCCGCTAGC AATCTGGCTT CGACGATCCA AGTGGCGGTA GAAGACGTTA TTGAATCTTA TGCGTCATTC ATGTAAATGC AGGCACGACG 
GCCATGGCTG GTCTTTCAGA GGTTCTTATG TGCGCTTTTT CGATGTGTTT TTTTTGTCCC AAGTTCGGTC TATC 

Retrieve as FASTA