Entry information : Ssrc1lsm3aGPx01
Entry ID 15328
Creation 2018-06-15 (Christophe Dunand)
Last sequence changes 2018-06-15 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Peroxidase information: Ssrc1lsm3aGPx01
Name Ssrc1lsm3aGPx01
Class Fungi-Bacteria glutathione peroxidase    [Orthogroup: Gpx3001]
Taxonomy Fungi/Metazoa; Fungi; Ascomycota; Ascomycota
Organism Stagonospora sp. SRC1lsM3a    [TaxId: 765868 ]
Cellular localisation N/D
Tissue type
Inducer
Repressor
Best BLASTp hits
Perox score E-value Ssrc1lsm3aGPx01
start..stop
S start..stop
PnoGPx 333 1e-118 1..170 55..224
CheGPx01_C5 309 5e-110 1..165 1..165
CheGPx01_C4 309 6e-110 1..165 1..165
CberGPx01 308 1e-109 1..167 1..167
Literature and cross-references Ssrc1lsm3aGPx01
Cluster/Prediction ref. JGI gene:   297791
Protein sequence: Ssrc1lsm3aGPx01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   170
PWM (Da):   %s   18838.6  
PI (pH):   %s   9.08
Sequence
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Send to Peroxiscan
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MASATSFYDF KPADKKGNPY PLSNLSNKVV LVVNTASKCG FTPQFGGLEK LYKDLKAQYP DDFEIIGFPC NQFGGQDPGS NDEIQSFCQV NYGVSFPVLG KIDVNGDKAD PAFEWLKNEK 
PGLMGLKRVK WNFEKFLVGR DGKVKGRWAS TKKPEDLKAD IEKEIKAGKA * 

Retrieve as FASTA  
Remarks Longer 5'end could be find
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCGTCCG CAACCTCGTT CTACGACTTC AAACCAGCTG ATAGTGCGTC CTCTCTCTCC CTTCCTGCTC TCGCACATCC GTCCTCCTCA CTACGTCTAT TCTAACCTCT GCCCCAACAG  AAAAAGGCAA CCCATACCCT CTCTCGAACC TTTCAAACAA AGTCGTCCTC GTTGTCAACA CGGCCTCGAA ATGCGGCTTC ACACCCCAAT TCGGAGGGCT CGAGAAACTC TACAAGGACC  TCAAGGCGCA GTACCCCGAC GACTTTGAAA TCATCGGCTT CCCTTGTAAT CAGTTTGGAG GACAGGATCC GGGATGTAAG TACACAACCT GGGCGATTGT GAAGGCGACT ACCACCTTCC  ATGCCCAATT TATAGTTTGA CGGCTCGCTA ACGCTCGTCG CAGCAAACGA CGAAATCCAA TCCTTCTGCC AAGTCAACTA CGGTGTGTCG TTCCCTGTTC TCGGCAAAAT CGACGTCAAC  GGCGACAAGG CGGACCCGGC GTTTGAGTGG CTCAAGAACG AGAAGCCTGG GCTGATGGGC TTGAAGCGCG TCAAGTGGAA CTTTGAGAAG TTCCTCGTGG GACGCGATGG CAAGGTCAAG 
GGACGGTGGG CGAGCACGAA GAAGCCTGAG GACTTGAAGG CGGATATTGA AAAGGAGATT AAGGCGGGCA AGGCTTAG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCGTCCG CAACCTCGTT CTACGACTTC AAACCAGCTG ATAAAAAAGG CAACCCATAC CCTCTCTCGA ACCTTTCAAA CAAAGTCGTC CTCGTTGTCA ACACGGCCTC GAAATGCGGC  TTCACACCCC AATTCGGAGG GCTCGAGAAA CTCTACAAGG ACCTCAAGGC GCAGTACCCC GACGACTTTG AAATCATCGG CTTCCCTTGT AATCAGTTTG GAGGACAGGA TCCGGGATCA  AACGACGAAA TCCAATCCTT CTGCCAAGTC AACTACGGTG TGTCGTTCCC TGTTCTCGGC AAAATCGACG TCAACGGCGA CAAGGCGGAC CCGGCGTTTG AGTGGCTCAA GAACGAGAAG  CCTGGGCTGA TGGGCTTGAA GCGCGTCAAG TGGAACTTTG AGAAGTTCCT CGTGGGACGC GATGGCAAGG TCAAGGGACG GTGGGCGAGC ACGAAGAAGC CTGAGGACTT GAAGGCGGAT 
ATTGAAAAGG AGATTAAGGC GGGCAAGGCT TAG 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CGAATGAATA CCAACGGCTC AAGCCGAGGT ATCTGCTCGA GTCGCGATTT CTTCTTCACG CTGGCAAGTC GGATCAACGC AAGGACCAGG TGTGAGATTT GTTCGCCCAT TCGCTATTCG  CTGTCTGCTA TTTGCTGTCG CGGCCAGACC GCAGGGTGTT TGTAACCCAT TTTCGGGTGG ATTTGTTGTT TGCACATGAC ACATGATTCG AGCGGCGAGC ACTGCCCCGC GAGGCATCCC  TGCAACGACG ACGGGTTTGC GACATAAGGA CTTGCGTACG CTGCGCTGTA CACCTTCTGC ATTCACTGCT ACACCACGAT CACGACCTTT TCTTCGACCC GCGCTACAGA CAGATATACC  AGCACGAAGA CGACGAAGAA ACACACAAGC GTACAGCTAC TACTCTACCA TGGCGTCCGC AACCTCGTTC TACGACTTCA AACCAGCTGA TAAAAAAGGC AACCCATACC CTCTCTCGAA  CCTTTCAAAC AAAGTCGTCC TCGTTGTCAA CACGGCCTCG AAATGCGGCT TCACACCCCA ATTCGGAGGG CTCGAGAAAC TCTACAAGGA CCTCAAGGCG CAGTACCCCG ACGACTTTGA  AATCATCGGC TTCCCTTGTA ATCAGTTTGG AGGACAGGAT CCGGGATCAA ACGACGAAAT CCAATCCTTC TGCCAAGTCA ACTACGGTGT GTCGTTCCCT GTTCTCGGCA AAATCGACGT  CAACGGCGAC AAGGCGGACC CGGCGTTTGA GTGGCTCAAG AACGAGAAGC CTGGGCTGAT GGGCTTGAAG CGCGTCAAGT GGAACTTTGA GAAGTTCCTC GTGGGACGCG ATGGCAAGGT  CAAGGGACGG TGGGCGAGCA CGAAGAAGCC TGAGGACTTG AAGGCGGATA TTGAAAAGGA GATTAAGGCG GGCAAGGCTT AGTTTGATAC TTGATACCAC ACGATATGAA GTCGGAGAGA 
GAAGGGGATA AGATGGGAAT TGAATACTTC TATTA 

Retrieve as FASTA