Entry information : BrPrx52-1Aa_other (TP7 / Bra028761 )
Entry ID 154
Creation 2009-08-11 (Christophe Dunand)
Last sequence changes 2009-08-11 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-07-23 (Christophe Dunand)
Peroxidase information: BrPrx52-1Aa_other (TP7 / Bra028761 )
Name (synonym) BrPrx52-1Aa_other (TP7 / Bra028761 )
Class Class III peroxidase    [Orthogroup: Prx007]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica rapa    [TaxId: 3711 ]
Cellular localisation N/D
Tissue type Roots
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BrPrx52-1Aa_other
start..stop
S start..stop
BstrPrx47 593 0 1..324 1..324
BoPrx52-1Cb_other 588 0 1..324 1..325
BnPrx52-2_other 588 0 1..324 1..325
BrPrx52-1Ab_other 587 0 1..324 1..325
Literature and cross-references BrPrx52-1Aa_other (TP7 / Bra028761 )
Literature Mazza,G. and Welinder,K.G. Covalent structure of turnip peroxidase 7. Cyanogen bromide fragments, complete structure and comparison to horseradish peroxidase C. Eur. J. Biochem. 108 (2), 481-489 (1980)
Protein ref. GenPept:   P00434 UniProtKB:   P00434
DNA ref. GenBank:   AC189631 (64127..65965)
EST ref. GenBank:   EX134272.1 [5' end]   EX137834.1 [3' end]
Cluster/Prediction ref. UniGene:   bra.14199
Protein sequence: BrPrx52-1Aa_other (TP7 / Bra028761 )
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   324 (304)
PWM (Da):   %s   33915.97 (31793.8)  
PI (pH):   %s   8.95 (8.95) Peptide Signal:   %s   cut: 21 range:21-324
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MASNQLVSIL VLVVMLLLQG DNNNVVKAQL TTNFYSTSCP NLLSTVKSGV KSAVSSQPRM GASILRLFFH DCFVNGCDGS ILLDDTSSFT GEQNAGPNRN SARGFTVIDT IKSAVEKACP  GVVSCADILA IAARDSVVQL GGPNWNVKVG RRDAKTASQA AANSNIPAPS MSLSQLISSF SAVGLSTRDM VALSGAHTIG QSRCVNFRAR VYNETNINAA FATLRQRSCP RAAGSGDANL 
APLDINSATS FDNSYFKNLM AQRGLLHSDQ VLFNGGSTDS IVRGYSNSPS SFNSDFAAAM IKMGDISPLT GSSGEIRKVC GKTN 

Retrieve as FASTA  
Remarks Complete sequence from genomic (3 introns), 9 ESTs and mature protein sequence (2 mismatches VIND instead of VIDT). Cultivar="Inbred line 'Chiifu'".