Entry information : SaPrx08
Entry ID 15975
Creation 2019-11-27 (Christophe Dunand)
Last sequence changes 2019-11-27 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2019-11-29 (Christophe Dunand)
Peroxidase information: SaPrx08
Name SaPrx08
Class Class III peroxidase     [Orthogroup: Prx013]*
Taxonomy Eukaryota Viridiplantae Streptophyta Orobanchaceae Striga
Organism Striga asiatica (witchweed)    [TaxId: 4170 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SaPrx08
start..stop
S start..stop
SaPrx09 418 4e-148 12..327 1..321
OcPrx01 397 2e-139 12..327 1..324
SaPrx02 386 2e-135 34..328 24..321
OrPrx02 384 1e-134 35..325 29..322
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 322691..323122 432 N° 2 321687..321852 166 N° 3 321204..321592 389  
complement(join(321204..321592,321687..321852,322691..323122))


exon

Literature and cross-references SaPrx08
Protein ref. GenBank:   GER29782.1
Protein sequence: SaPrx08
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   328
PWM (Da):   %s   35342.93  
PI (pH):   %s   8.74
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MPFPTSKSKN IMENSKPANF VLTLTTLSLI FTLSQAQLSE TFYARTCPNA LGTIRATIQQ AVKRESRMAA SLIRLHFHDC FVQGCDASIL LDGINSEKSA GPNANSVRGY EVIEAAKTAV  ERICPRVVSC ADILAVAARD AAVLSGGPSW AVKLGRRDSK TFNLEAANTD LPSPFSTLED LTAAFAKKGL NQREMVALSG AHSIGQARCM FFQSRIDNIN ASDIESGFAA QLNRTCNGES 
TKRAPLDFAT PNTLDNKYYK NLVSHKGLFQ SDQVLFSVGS TTAPLVSNYS AKPNLFSTDF ANSMLKMSEI ELLLGTNGTI RRVCNATS 

Retrieve as FASTA  
Remarks Complete sequence from genomic.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TTGCCTTTCC CAACTTCAAA GTCCAAAAAC ATAATGGAAA ACTCAAAGCC CGCCAACTTC GTCCTTACAC TAACCACACT GTCACTCATA TTCACACTCT CCCAAGCCCA ACTATCCGAG  ACTTTCTACG CCCGTACCTG TCCCAATGCA CTGGGTACAA TCCGTGCTAC CATCCAGCAG GCCGTTAAGC GCGAGTCCCG CATGGCGGCT TCCTTAATCC GCCTCCATTT TCATGACTGC  TTCGTGCAGG GCTGTGATGC TTCGATCTTG CTGGACGGTA TCAATAGTGA GAAATCGGCC GGCCCAAATG CAAATTCTGT AAGAGGTTAC GAGGTGATCG AGGCCGCCAA GACAGCTGTC  GAGAGGATAT GCCCTCGTGT GGTATCGTGT GCGGATATTC TGGCCGTGGC AGCACGTGAT GCTGCTGTTT TGAGTGGCGG GCCGTCATGG GCCGTGAAGC TGGGGAGAAG AGATTCCAAA  ACGTTTAACC TTGAGGCCGC AAACACCGAT CTACCAAGCC CATTTTCCAC CCTTGAAGAC CTCACTGCTG CTTTTGCCAA AAAAGGGCTC AATCAAAGGG AAATGGTCGC CCTCTCAGGT  GCACACTCTA TAGGCCAAGC CCGGTGCATG TTCTTCCAAT CGAGGATAGA CAATATTAAC GCATCCGACA TCGAATCTGG CTTTGCTGCC CAACTGAATC GCACGTGTAA CGGGGAAAGT  ACTAAAAGGG CCCCGCTTGA CTTTGCCACA CCAAACACGC TGGACAACAA ATACTACAAG AACCTCGTCA GTCACAAGGG TCTCTTCCAG TCGGACCAGG TTTTATTTAG TGTGGGGTCC  ACTACAGCCC CACTAGTCTC CAACTATAGC GCCAAGCCTA ATCTCTTCAG CACCGACTTT GCAAATTCCA TGCTCAAGAT GTCCGAGATT GAGCTCTTGC TTGGAACAAA CGGGACCATA 
AGGAGAGTTT GTAATGCCAC TAGCTAG 

Retrieve as FASTA