Entry information : SaPrx09
Entry ID 15976
Creation 2019-11-27 (Christophe Dunand)
Last sequence changes 2019-11-27 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2019-11-29 (Christophe Dunand)
Peroxidase information: SaPrx09
Name SaPrx09
Class Class III peroxidase    [Orthogroup: Prx012]
Taxonomy Eukaryota Viridiplantae Streptophyta Orobanchaceae Striga
Organism Striga asiatica (witchweed)    [TaxId: 4170 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SaPrx09
start..stop
S start..stop
SaPrx[P]10 543 0 1..320 1..304
OcPrx01 487 3e-175 1..321 1..324
OrPrx02 480 2e-172 24..319 27..322
SaPrx02 471 5e-169 24..321 23..320
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 272263..272676 414 N° 2 272024..272189 166 N° 3 271114..271505 392  
complement(join(271114..271505,272024..272189,272263..272676))


exon

Literature and cross-references SaPrx09
Protein ref. GenBank:   GER29780.1
Protein sequence: SaPrx09
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   323
PWM (Da):   %s   34483.51  
PI (pH):   %s   9.65
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGTTKAINFV LTLTTISLLI STTPSQAQLS PTFYARTCPN ALSTIRTSIR QAIARETRMA ASIIRLHFHD CFVQGCDASI LLDDSPTIRS EKSAGPNANS ARGFDVIEAA KTAVERICPG  VVSCADILAV AARDASVAVG GPSWPVRVGR RDSTTANFNA ANTDLPGPSS TAQGLINAFR NKGLNQTDMV ALSGAHTIGL AQCVFFRSRI YSNGTDIDPN FATTRRRTCP QSGGNTNLAP 
LDLVTQNSFD NNYYRNLVQR RGLLQSDQVL FTSGLTNALV TTYSNDSRRF AADFASAMLR MSEITPLVGS RGVIRRVCNA TGR 

Retrieve as FASTA  
Remarks Complete sequence from genomic.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGCACCA CGAAAGCCAT CAACTTTGTC CTAACCCTAA CAACAATCTC ACTACTCATC TCCACCACCC CATCACAAGC CCAGCTGTCC CCCACTTTCT ACGCCCGTAC ATGTCCCAAT  GCACTCAGTA CAATCCGTAC TTCCATCCGG CAGGCGATTG CCCGTGAGAC CCGCATGGCG GCCTCCATTA TCCGCCTACA TTTTCATGAC TGCTTTGTAC AAGGTTGTGA CGCTTCAATC  CTTCTGGACG ACTCCCCCAC AATCCGAAGC GAGAAATCGG CCGGCCCAAA TGCCAATTCC GCCAGAGGGT TTGATGTGAT AGAGGCTGCC AAGACAGCAG TCGAGCGTAT ATGCCCGGGC  GTAGTCTCGT GCGCAGACAT TTTAGCGGTG GCTGCACGTG ATGCCTCAGT TGCTGTTGGA GGGCCATCAT GGCCGGTGAG AGTTGGGAGA AGGGATTCTA CCACTGCCAA CTTCAATGCA  GCTAACACAG ATTTGCCGGG ACCTTCTTCT ACCGCACAAG GCCTCATTAA TGCCTTCCGC AACAAGGGAC TCAATCAGAC AGACATGGTT GCCCTCTCAG GGGCACACAC GATAGGGCTA  GCCCAGTGCG TCTTCTTCCG GAGCAGAATC TACAGCAACG GCACTGACAT CGACCCCAAT TTTGCAACCA CAAGGAGACG CACGTGCCCT CAGTCGGGAG GGAACACGAA CCTTGCCCCG  CTAGACCTCG TGACCCAAAA CTCCTTCGAC AACAACTACT ACAGAAACCT GGTCCAGCGG CGGGGGCTAC TACAGTCGGA TCAGGTGCTT TTCACAAGTG GGTTAACCAA CGCACTCGTC  ACCACTTACA GCAATGACAG TCGGCGCTTT GCGGCCGACT TTGCCAGCGC CATGCTGAGG ATGTCTGAGA TTACGCCGTT GGTGGGGTCC AGAGGGGTCA TAAGGAGGGT TTGCAACGCC 
ACAGGTAGAT GA 

Retrieve as FASTA