Entry information : SaPrx29
Entry ID 15996
Creation 2019-11-27 (Christophe Dunand)
Last sequence changes 2019-11-27 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2019-12-03 (Christophe Dunand)
Peroxidase information: SaPrx29
Name SaPrx29
Class Class III peroxidase    [Orthogroup: Prx002]
Taxonomy Eukaryota Viridiplantae Streptophyta Orobanchaceae Striga
Organism Striga asiatica (witchweed)    [TaxId: 4170 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SaPrx29
start..stop
S start..stop
AmPrx01 617 0 1..334 1..331
TvePrx01 607 0 10..333 6..327
MguPrx06 604 0 2..334 3..334
NtPrx60-1B 603 0 10..334 6..326
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 2172791..2173030 240 N° 2 2173114..2173302 189 N° 3 2173723..2173888 166 N° 4 2174045..2174454 410
join(2172791..2173030,2173114..2173302,2173723..2173888,2174045..2174454)


exon

Literature and cross-references SaPrx29
Protein ref. GenBank:   GER52947.1
Protein sequence: SaPrx29
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   334
PWM (Da):   %s   37669.24  
PI (pH):   %s   8.41
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MCVNSISIFL FLTSALCFSS LSSFTVAENE NSAGLAMNYY KDTCPQAEDI IKEQVQLLYK RHKNTAFSWL RNIFHDCFVE SCDASLLLDS TRRMLSEKET DRSFGMRNFR YIETIKEALE  RECPGIVSCS DILVLSARDG IVALGGPHIP LKTGRRDGRK SRADILEQHL PDHNESMSVV LDRFANIGIN TPGVVALLGA HSVGRTHCVK LVHRLYPEVD PTLNPGHVEH MLYKCPDAIP 
DPKAVQYVRN DRGTPMKLDN NYYRNILDNK GLLIVDHQLA TDKRTKPFVK KMAKREDYFF KEFARAITIL SENNPLTGTK GEIRKQCNVA NKLH 

Retrieve as FASTA  
Remarks Complete sequence from genomic.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGTGTGTGA ATTCCATATC CATCTTCCTC TTCCTCACTT CAGCTCTATG CTTCTCATCA CTATCTTCAT TTACAGTTGC AGAGAATGAG AACTCAGCTG GGCTTGCCAT GAACTATTAC  AAGGACACGT GTCCACAAGC AGAGGACATC ATAAAAGAGC AAGTCCAGCT TCTATACAAG CGCCACAAGA ACACCGCTTT CTCCTGGCTC AGGAACATCT TCCATGACTG CTTTGTTGAG  TCATGTGATG CATCTCTTTT GCTGGACTCG ACGAGGAGAA TGCTGTCGGA GAAGGAGACA GATAGAAGCT TCGGAATGAG GAATTTCAGG TACATAGAGA CGATTAAGGA GGCTCTTGAA  AGAGAGTGCC CAGGCATTGT TTCGTGCTCG GATATTCTTG TGTTGTCCGC CCGAGATGGC ATTGTTGCTC TTGGAGGGCC ACATATCCCA CTTAAAACAG GAAGAAGAGA TGGTCGGAAA  AGCAGAGCAG ATATATTAGA GCAGCATTTA CCAGACCACA ATGAGAGCAT GAGTGTTGTT CTCGACCGCT TTGCAAACAT AGGCATCAAC ACCCCTGGAG TAGTTGCGTT GCTCGGGGCC  CACAGCGTGG GCCGAACCCA CTGCGTGAAG CTGGTCCACA GGCTCTATCC AGAAGTGGAC CCCACACTAA ACCCAGGCCA CGTGGAGCAC ATGCTGTACA AGTGTCCTGA TGCAATACCC  GACCCAAAGG CCGTGCAGTA CGTGAGGAAT GATCGTGGCA CGCCAATGAA GCTCGACAAT AACTACTATC GAAACATACT CGATAACAAA GGTCTCCTGA TCGTTGACCA CCAGCTGGCA  ACCGATAAAC GGACCAAGCC TTTTGTTAAG AAGATGGCCA AGAGGGAGGA TTATTTCTTT AAGGAGTTTG CAAGGGCTAT TACGATTCTG TCAGAGAATA ATCCGCTCAC CGGGACTAAA 
GGTGAGATTA GGAAGCAGTG TAATGTTGCC AACAAGCTGC ATTGA 

Retrieve as FASTA