Entry information : SaPrx34
Entry ID 16001
Creation 2019-11-27 (Christophe Dunand)
Last sequence changes 2019-11-27 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2019-12-03 (Christophe Dunand)
Peroxidase information: SaPrx34
Name SaPrx34
Class Class III peroxidase    [Orthogroup: Prx008]
Taxonomy Eukaryota Viridiplantae Streptophyta Orobanchaceae Striga
Organism Striga asiatica (witchweed)    [TaxId: 4170 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SaPrx34
start..stop
S start..stop
MguPrx24 504 0 1..316 19..330
CclPrx07 492 1e-177 4..317 9..322
CsPrx15 492 1e-177 4..317 9..322
MePrx83 485 6e-175 1..316 1..314
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 858792..858995 204 N° 2 859145..859336 192 N° 3 859551..859719 169 N° 4 859945..860336 392
join(858792..858995,859145..859336,859551..859719,859945..860336)


exon

Literature and cross-references SaPrx34
Protein ref. GenBank:   GER28117.1
Protein sequence: SaPrx34
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   317
PWM (Da):   %s   33844.04  
PI (pH):   %s   7.98
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAKLLIVSFV MLLFAIDSSS AQLSTSYYEK TCPNVFTTVK SAVKSAVDKE KRMGASLLRL HFHDCFVQGC DGSVLLDDTS SFTGEQTARP NSNSLRGFDV IDDIKSKVEY VCPGIVSCAD  ILAIAARDSV VLLGGPTWEV KVGRKDSKTA SLSAANSGVI PPPTSNLDDL INKFKAKGLS TKDMVVLSGA HTIGQARCTV FRGRIYNESN IEASLARTRQ GTCPRASGSG DNNLAPLDFQ 
SPTSFDNAYF KNLVAQKGLM HSDQVLYNGG STDSIVGSYS KDPKAFEKDF ADAMIRMGDI SPLTGSNGEI RKVCGKP 

Retrieve as FASTA  
Remarks Complete sequence from genomic.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTAAGC TTCTAATTGT TTCCTTCGTT ATGCTATTGT TCGCGATCGA CAGCTCGTCT GCTCAATTAT CCACGAGCTA TTACGAAAAG ACTTGCCCGA ACGTGTTTAC AACAGTGAAA  TCGGCCGTTA AATCTGCAGT TGATAAGGAA AAACGCATGG GGGCTTCCCT CTTGCGTCTC CACTTCCACG ATTGTTTCGT TCAAGGCTGT GATGGATCCG TACTTCTGGA TGACACGTCA  TCGTTCACCG GCGAACAAAC GGCCCGTCCG AACTCGAATT CGCTTAGGGG CTTCGATGTA ATTGACGACA TTAAGTCAAA GGTGGAATAC GTGTGCCCTG GCATCGTGTC GTGTGCTGAT  ATTTTAGCCA TTGCTGCTCG GGACTCGGTT GTTCTTCTTG GTGGGCCCAC TTGGGAAGTT AAAGTTGGGA GGAAAGACTC AAAGACAGCA AGCCTTTCAG CTGCAAACAG TGGTGTAATA  CCACCACCAA CCTCAAATCT TGATGACCTT ATAAACAAGT TCAAAGCCAA GGGTCTCTCC ACTAAGGACA TGGTTGTATT ATCAGGAGCA CACACCATAG GGCAAGCAAG GTGTACTGTG  TTCAGAGGCC GAATATACAA CGAGTCGAAC ATCGAGGCCT CGCTTGCTCG GACGAGACAG GGGACGTGCC CTAGAGCTAG CGGCTCGGGA GATAACAACT TGGCCCCACT TGACTTTCAA  AGCCCGACTT CTTTCGACAA TGCCTACTTC AAAAACCTCG TGGCACAAAA GGGACTCATG CACTCGGATC AGGTTCTGTA CAATGGAGGC TCGACTGACT CTATTGTCGG CTCGTATAGC 
AAAGACCCGA AAGCTTTCGA GAAGGACTTT GCTGATGCCA TGATTAGGAT GGGTGACATC AGCCCGCTCA CCGGGTCGAA TGGAGAGATC AGGAAAGTTT GTGGAAAACC CAATTGA 

Retrieve as FASTA