Entry information : SaPrx43
Entry ID 16010
Creation 2019-11-27 (Christophe Dunand)
Last sequence changes 2019-11-27 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2019-12-04 (Christophe Dunand)
Peroxidase information: SaPrx43
Name SaPrx43
Class Class III peroxidase    [Orthogroup: Prx022]
Taxonomy Eukaryota Viridiplantae Streptophyta Orobanchaceae Striga
Organism Striga asiatica (witchweed)    [TaxId: 4170 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SaPrx43
start..stop
S start..stop
PpePrx04 350 4e-120 44..360 4..347
PpePrx50 346 1e-118 44..360 12..342
RcPrx72 343 1e-117 36..360 20..349
VvPrx90 337 9e-115 8..365 1..375
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 365366..365629 264 N° 2 366685..366882 198 N° 3 367542..367707 166 N° 4 368016..368485 470
join(365366..365629,366685..366882,367542..367707,368016..368485)


exon

Literature and cross-references SaPrx43
Protein ref. GenBank:   GER37566.1
Protein sequence: SaPrx43
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   365
PWM (Da):   %s   40181.9  
PI (pH):   %s   5.81
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MSSGKIDVRS PAFPLLFLVA SIFIGASLPR VSSQNSTSIE QIFQYDSYRE TCPDAEKIVW SKMADIVSGN ENATAQLLRL LFHDCFIQGC DASVMLNDTM GMPNQTTERH ADPNKTLKGF  DFVEEIKELV ESECPGVVSC ADILVLATRD AIALSGGPYY PAFTGRKDST RYYTAEATEE IPRPNSNISE TLRLFAQRGF NERETVALLG SHNIGRINCG FIASRINMFD NGAIPLDFLR  KMRTTCQVPT SSMRNSENKL KVKRVYETSR SMQYYEGLSS SSGQLPGGGF GNHYYQALLK GKGILTADQE LMANEQTAKA VFEYAEDADK FRFDFAGAMM KLSNLNVLVG PAGEVRRICS 
SVNSS 

Retrieve as FASTA  
Remarks Complete sequence from genomic.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGAGTTCGG GGAAAATCGA TGTGCGTAGT CCTGCATTTC CGTTGCTTTT TCTCGTCGCG AGCATTTTCA TCGGCGCCAG TCTTCCCCGC GTTTCGTCGC AGAATTCCAC TTCAATCGAG  CAGATTTTCC AGTACGATAG CTACAGGGAG ACGTGTCCAG ATGCGGAGAA GATAGTGTGG AGTAAAATGG CGGATATCGT TTCTGGAAAC GAGAACGCCA CGGCGCAACT GCTGAGGCTT  CTCTTTCACG ATTGCTTTAT TCAGGGATGT GATGCCTCAG TGATGCTAAA TGATACCATG GGGATGCCCA ATCAAACTAC AGAACGACAT GCTGACCCGA ACAAGACTCT AAAGGGGTTT  GACTTCGTTG AGGAAATAAA AGAATTGGTT GAGAGCGAAT GTCCGGGGGT GGTTTCTTGT GCTGACATCC TTGTTCTTGC AACTCGAGAC GCGATTGCTT TGTCCGGTGG ACCTTATTAC  CCGGCTTTCA CTGGCAGAAA AGACAGCACC CGTTATTATA CCGCTGAGGC TACTGAGGAA ATTCCGAGAC CAAACAGCAA CATATCCGAA ACCCTTAGAT TGTTTGCTCA ACGTGGATTT  AACGAGAGGG AGACTGTAGC TCTTTTAGGG TCCCACAACA TTGGTCGGAT CAACTGCGGT TTCATAGCAT CGAGGATCAA CATGTTCGAC AATGGGGCCA TCCCTCTCGA TTTCCTTCGA  AAGATGAGAA CGACTTGTCA AGTCCCAACT AGCAGCATGA GAAACTCTGA AAACAAGTTA AAGGTGAAGC GTGTATATGA AACTTCACGA AGCATGCAAT ATTACGAGGG ACTTTCGTCA  TCTTCAGGCC AGCTTCCCGG AGGTGGATTT GGCAATCACT ATTATCAGGC GCTACTAAAA GGCAAAGGCA TTCTGACTGC CGACCAAGAA CTGATGGCGA ACGAGCAGAC AGCAAAAGCG  GTTTTTGAGT ATGCTGAGGA TGCAGATAAA TTTAGGTTTG ACTTTGCAGG TGCAATGATG AAGCTGTCCA ATCTGAATGT GCTCGTCGGG CCAGCTGGAG AGGTGCGGAG AATCTGTTCT 
AGTGTGAACT CTTCTTAA 

Retrieve as FASTA