Entry information : SaPrx46
Entry ID 16013
Creation 2019-11-27 (Christophe Dunand)
Last sequence changes 2019-11-27 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2019-12-04 (Christophe Dunand)
Peroxidase information: SaPrx46
Name SaPrx46
Class Class III peroxidase    [Orthogroup: Prx025]
Taxonomy Eukaryota Viridiplantae Streptophyta Orobanchaceae Striga
Organism Striga asiatica (witchweed)    [TaxId: 4170 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SaPrx46
start..stop
S start..stop
MguPrx88 570 0 7..340 9..341
CroPrx18 555 0 17..340 1..324
CsPrx41 523 0 12..340 13..338
CclPrx93 523 0 12..340 13..338
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1706511..1706750 240 N° 2 1706877..1707068 192 N° 3 1707170..1707335 166 N° 4 1707441..1707865 425
join(1706511..1706750,1706877..1707068,1707170..1707335,1707441..1707865)


exon

Literature and cross-references SaPrx46
Protein ref. GenBank:   GER43831.1
Protein sequence: SaPrx46
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   340
PWM (Da):   %s   37652.06  
PI (pH):   %s   6.85
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MACPDCAKGL TFQFLLLLLA LCMVFSRSHA SYPPLTLDYY KKTCPTVLEI VRKEMECAVL SNPRNAALIL RLHFHDCFVQ GCDGSVLLDD TITLKGEKKA ANNKNALKGF EIIDRIKNKL  ESECPGIVSC ADILTVAARD AVILVGGPYW PVFLGRKDSK TGGYALVDTN LPKADEGLLS IISKFIYQGL SVTDMVALSG AHTIGMARCM NFRNRIYGDF ETTSGLNPVS NEYLKNLKSV 
CPPLKGSENQ ESAMDYFSPN FFDNSYYQIL LRGEGLINSD QELYSSVLAV ETKRLVVKYA ENPIAFFEQF SESMVRLGNI TNPDTYVNGE VRKNCRFVNT 

Retrieve as FASTA  
Remarks Complete sequece from genomic.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCATGTC CTGATTGTGC AAAAGGCCTT ACTTTCCAAT TCTTGCTATT ATTATTAGCC CTGTGCATGG TGTTTTCAAG GTCTCATGCA AGTTACCCGC CATTAACTTT AGATTACTAC  AAAAAAACGT GCCCGACGGT TCTTGAAATA GTTCGAAAAG AAATGGAATG TGCAGTTTTG TCTAATCCAC GCAATGCGGC TTTGATTTTG CGCTTACATT TCCACGATTG CTTTGTTCAG  GGTTGTGATG GGTCAGTATT GCTGGACGAC ACAATCACAT TAAAAGGAGA GAAAAAAGCA GCAAACAATA AAAATGCCCT CAAAGGATTC GAAATCATAG ACAGGATAAA GAACAAGCTC  GAGTCCGAGT GCCCTGGAAT CGTCTCTTGT GCCGATATTC TAACTGTTGC CGCTAGAGAT GCAGTTATTT TGGTTGGTGG GCCATATTGG CCTGTTTTTC TCGGGAGAAA AGACTCGAAA  ACTGGTGGCT ATGCGCTCGT CGATACTAAT CTTCCCAAAG CAGACGAAGG GCTTTTGTCA ATTATATCAA AGTTTATTTA TCAAGGCCTC TCGGTCACTG ATATGGTGGC GCTTTCGGGG  GCCCACACGA TAGGCATGGC CCGTTGCATG AACTTCAGGA ACAGAATATA CGGAGATTTT GAGACAACTT CAGGACTAAA TCCGGTCTCA AATGAATACC TCAAAAACTT GAAATCTGTT  TGTCCGCCTC TTAAAGGTTC GGAAAATCAA GAGTCGGCTA TGGACTACTT TTCGCCGAAT TTTTTCGACA ATTCGTATTA CCAAATACTA TTAAGAGGGG AGGGACTTAT AAATTCGGAC  CAGGAACTTT ATTCGAGCGT TTTAGCAGTC GAAACGAAAA GGCTGGTCGT GAAATATGCC GAGAATCCAA TCGCTTTTTT CGAGCAATTT TCTGAGTCAA TGGTGAGATT GGGGAACATT 
ACAAATCCTG ATACTTATGT TAATGGAGAA GTTAGGAAAA ACTGCAGGTT TGTGAATACA TGA 

Retrieve as FASTA