Entry information : SaPrx60
Entry ID 16027
Creation 2019-11-27 (Christophe Dunand)
Last sequence changes 2019-11-27 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2019-12-06 (Christophe Dunand)
Peroxidase information: SaPrx60
Name SaPrx60
Class Class III peroxidase    [Orthogroup: Prx013]
Taxonomy Eukaryota Viridiplantae Streptophyta Orobanchaceae Striga
Organism Striga asiatica (witchweed)    [TaxId: 4170 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SaPrx60
start..stop
S start..stop
SaPrx54 551 0 1..323 1..324
SaPrx53 548 0 1..323 1..324
MguPrx40 470 2e-168 19..323 20..324
MguPrx102 430 9e-153 4..323 6..324
Literature and cross-references SaPrx60
Protein ref. GenBank:   GER53241.1 [Incorrect prediction]
Protein sequence: SaPrx60
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   323
PWM (Da):   %s   35100.48  
PI (pH):   %s   6.5
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MATQKLFVLC FALVFVLRAG AEDLSTHFYD TSCPNVEAIV QQTTALFVSL NPSLAPALLR MHFHDCFVRG CDGSVLLNST ANNKAERDSF PNLSLRGFQV IDAVKSEVEK YCPGKVSCAD  ILALVARDAV SQILGPYWEV PLGRRDGNVS IANEVLTNLP APFFNITQLI ASFTGKGLSV KDLVVLSGGH TIGVSHCSSF TNRLYNFTGN NDADPSMDPA YVAVLKRQCS PTDTTTVVPM 
DPGSSMHFDT HYFSTVGTMR GLFTSDAELL KNEETRAYVQ QHSTFFRNPS FFTDFAESMV KMGKIGVLTG TDGQIRRVCS AVN 

Retrieve as FASTA  
Remarks Complete sequence from genomic. The prediction from NCBI (GER53241.1) contains 3 ORFs.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCAACTC AGAAGCTATT TGTTCTTTGC TTCGCGCTTG TCTTTGTTCT TCGGGCCGGG GCCGAAGACC TGTCGACCCA TTTTTATGAT ACGTCGTGCC CGAATGTTGA GGCTATCGTG  CAACAAACGA CTGCATTATT CGTTTCTCTC AATCCATCAC TTGCTCCGGC TTTGCTTCGG ATGCATTTCC ATGATTGTTT CGTTAGGGGT TGTGATGGAT CCGTACTACT AAACTCCACG  GCTAACAACA AGGCCGAGAG GGACTCGTTT CCGAACCTCA GCCTTAGAGG GTTTCAAGTC ATTGATGCCG TGAAATCTGA AGTCGAAAAA TATTGCCCAG GAAAAGTTTC TTGTGCAGAC  ATACTGGCAT TAGTGGCTCG CGATGCAGTA TCACAGATAC TGGGGCCATA TTGGGAAGTT CCCTTAGGCC GGCGAGATGG AAATGTGTCG ATTGCGAATG AGGTGCTAAC GAATCTGCCG  GCTCCTTTCT TCAACATCAC CCAACTCATT GCCAGTTTCA CGGGCAAGGG TTTAAGCGTC AAGGACCTCG TTGTCCTCTC AGGTGGGCAC ACGATCGGTG TTTCGCACTG CTCGAGCTTC  ACGAACCGTC TGTACAACTT CACGGGCAAC AACGACGCGG ACCCGAGCAT GGACCCAGCG TACGTGGCTG TCCTCAAGAG GCAATGCTCC CCTACGGACA CGACCACCGT AGTCCCGATG  GACCCCGGCA GCTCAATGCA TTTCGATACC CACTACTTCT CGACAGTGGG TACAATGAGG GGGCTGTTCA CGTCAGATGC AGAGCTTCTG AAGAACGAAG AGACGAGAGC TTACGTGCAG  CAGCACTCAA CATTTTTCCG TAACCCGAGT TTTTTCACCG ATTTTGCCGA GTCAATGGTG AAGATGGGGA AGATTGGGGT GCTTACGGGG ACTGACGGCC AGATCAGAAG GGTCTGCTCT 
GCCGTTAATT AG 

Retrieve as FASTA