Entry information : CcampPrx21(Cuscam_OOIL01000047.1_FGenesh411.1)
Entry ID 16098
Creation 2020-01-11 (Christophe Dunand)
Last sequence changes 2020-01-11 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-01-15 (Christophe Dunand)
Peroxidase information: CcampPrx21(Cuscam_OOIL01000047.1_FGenesh411.1)
Name CcampPrx21(Cuscam_OOIL01000047.1_FGenesh411.1)
Class Class III peroxidase    [Orthogroup: Prx101]
Taxonomy Viridiplantae (green plants); Streptophyta; Angiospermae; Eudicotyledons
Organism Cuscuta campestris    [TaxId: 132261 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CcampPrx21
start..stop
S start..stop
CcampPrx30 695 0 1..362 1..362
CcampPrx22 695 0 1..362 1..362
CcampPrx33 643 0 1..361 1..361
CcampPrx34 634 0 1..362 1..362
Literature and cross-references CcampPrx21(Cuscam_OOIL01000047.1_FGenesh411.1)
Protein sequence: CcampPrx21(Cuscam_OOIL01000047.1_FGenesh411.1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   362
PWM (Da):   %s   38389.24  
PI (pH):   %s   7.89
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MASSFVSRLV LSLSFLALFL AAYSVYHNAA VGQGPRRPLI KAAIPSWLDE ATTIESAADL LSYFGLGRSS GRLSDQACVF SAVKEVVDAA INNETRMGAS LIRLHFHDCF VDGCDGGILL  NDTANFTGEQ GAAPNSNSVR GFEVIELAKR NAKTKCSDTP VSCADVLAIA ARDSFTKFTG RTYNVTIGAR RDARTANLTG ANTQLPAPFD SLLVQTQKFA DKGFTQREMV VLAGAHTVGF  SRCAIVCQNN SINPNRTATL PCNCSASTLT GLVGLDPTPA AFDNRYFRQL VSGQGLLFSD AELMTSNTTG TVARRYRDAT GAFLSDFAAA MVKMSTLPPS AGTQLEIRDV CSRVNGNSVE 
SM 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Incorrect prediction from FGeneSH (Exon was not predicted).
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTTCTT CCTTTGTGTC CCGGCTCGTC CTTTCCTTGA GCTTCTTAGC TCTCTTCTTA GCTGCCTACT CCGTTTACCA CAACGCCGCC GTGGGTCAAG GCCCCCGCCG CCCCCTTATT  AAGGCGGCGA TCCCCAGCTG GCTGGACGAG GCAACGACGA TTGAGTCGGC CGCCGACTTG CTGTCCTACT TCGGTCTCGG GAGATCCTCC GGCAGACTCT CCGACCAAGC GTGCGTGTTC  TCCGCCGTGA AGGAAGTCGT GGACGCCGCC ATCAACAACG AGACTCGGAT GGGCGCCTCC CTCATCCGCC TCCACTTCCA CGACTGCTTT GTCGATGGTT GTGACGGTGG AATCCTCCTG  AACGACACGG CCAACTTCAC CGGAGAACAA GGCGCGGCCC CAAATAGTAA CTCTGTGAGA GGGTTTGAAG TTATAGAACT CGCAAAGCGT AATGCCAAAA CCAAATGCTC CGACACCCCC  GTCTCTTGTG CCGATGTTTT AGCCATTGCT GCTCGTGATT CCTTCACCAA GTTCACAGGT CGAACTTATA ACGTGACGAT AGGCGCCAGA CGCGACGCAA GGACGGCGAA CCTCACCGGA  GCCAACACCC AGCTTCCGGC GCCGTTCGAC AGCCTCCTCG TCCAAACCCA GAAGTTTGCC GACAAGGGGT TCACCCAGAG GGAGATGGTT GTTTTGGCAG GAGCGCACAC GGTGGGATTT  TCCCGTTGTG CGATCGTGTG CCAGAACAAC AGCATCAACC CCAATAGAAC CGCCACCCTG CCATGCAACT GCTCTGCCTC CACCCTCACC GGCTTGGTCG GGCTGGACCC GACTCCCGCC  GCTTTCGACA ACCGGTATTT CCGGCAGTTG GTCAGCGGTC AAGGCCTCCT ATTCTCAGAC GCCGAGCTGA TGACAAGCAA CACGACCGGC ACCGTTGCTA GGAGGTACAG GGATGCCACC  GGCGCTTTCC TCTCCGACTT CGCCGCCGCA ATGGTGAAGA TGAGCACCTT GCCGCCCTCC GCCGGGACTC AGCTTGAAAT TCGTGACGTG TGCAGCCGGG TCAACGGCAA CTCTGTTGAG 
TCTATGTAG 

Retrieve as FASTA