Entry information : CcampPrx38(Cuscam_OOIL01000036.1_FGenesh202.1)
Entry ID 16116
Creation 2020-01-11 (Christophe Dunand)
Last sequence changes 2020-01-11 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-01-18 (Christophe Dunand)
Peroxidase information: CcampPrx38(Cuscam_OOIL01000036.1_FGenesh202.1)
Name CcampPrx38(Cuscam_OOIL01000036.1_FGenesh202.1)
Class Class III peroxidase    [Orthogroup: Prx009]
Taxonomy Viridiplantae (green plants); Streptophyta; Angiospermae; Eudicotyledons
Organism Cuscuta campestris    [TaxId: 132261 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CcampPrx38
start..stop
S start..stop
CcampPrx39 642 0 1..326 1..327
InPrx07 484 5e-174 1..326 4..328
PtPrx26 479 3e-172 1..326 4..328
PtPrx27 473 1e-169 1..326 7..327
Literature and cross-references CcampPrx38(Cuscam_OOIL01000036.1_FGenesh202.1)
Protein sequence: CcampPrx38(Cuscam_OOIL01000036.1_FGenesh202.1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   326
PWM (Da):   %s   34870.39  
PI (pH):   %s   8.15
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGSVWFLILC ILGSAGPVLS KLQTNFYSQT CPNAESLIKD FVKTHISNAP SLAAPLLRMH FHDCFVRGCD GSVLLNSTSS TGNQTEKVAP PNQTLRGFDF IDRVKREVEK VCPGVVSCAD  VLALTARDAV VAIGGPSWNV PTGRRDGLFS NASEATNNIP APTSNFTNLR TLFANQGLNL TDLVLLSGAH TIGLSHCSSF SARLYNFNGT NGSQDPALDS EYAANLRSKK CRSANDNTTR 
VEMDPGSFRT FDLGYYAQVL KRRGLFQSDA ALLTSNATLA LVNALASGSL QSFEAQFAMS MEKMGRINVM TGTQGEIRGN CAVTNS 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Incorrect prediction from FGeneSH (exon 4 was not predicted).
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGCTCCG TTTGGTTTCT GATTCTGTGC ATTCTGGGAA GTGCAGGCCC CGTTCTCTCC AAGTTGCAGA CCAATTTCTA CTCCCAAACG TGCCCCAATG CCGAGAGCCT CATCAAGGAC  TTCGTCAAAA CCCACATTTC AAATGCCCCT TCTCTTGCAG CCCCCCTGCT CCGGATGCAC TTCCACGATT GCTTCGTCAG GGGTTGTGAC GGGTCAGTGC TTCTGAATAG CACGAGCAGC  ACGGGGAACC AAACCGAGAA GGTGGCTCCT CCGAACCAGA CGCTGAGAGG GTTCGACTTC ATCGACAGGG TGAAGAGGGA GGTGGAGAAA GTGTGCCCCG GGGTCGTTTC GTGTGCCGAT  GTTCTCGCTC TCACCGCCAG AGACGCCGTC GTCGCTATTG GAGGGCCGTC ATGGAATGTC CCGACGGGTC GGCGGGACGG ATTGTTTTCG AACGCATCGG AGGCGACGAA CAACATCCCG  GCCCCCACCA GCAACTTCAC TAACCTCCGG ACACTCTTTG CCAACCAGGG TCTTAACCTT ACCGACCTCG TCCTCCTATC TGGGGCACAC ACGATCGGCT TATCGCACTG CTCGTCGTTC  TCGGCCCGCC TTTACAACTT CAACGGGACG AACGGGTCCC AGGACCCGGC ATTGGACAGC GAGTACGCGG CCAACCTGAG GAGCAAGAAG TGCCGGTCGG CGAACGACAA CACGACGAGG  GTGGAGATGG ACCCGGGGAG CTTCCGGACA TTCGATCTCG GGTACTACGC CCAAGTCCTC AAGAGGAGGG GGCTGTTCCA GTCCGACGCG GCGTTGCTGA CGAGCAACGC CACGCTGGCC  CTGGTCAATG CCCTCGCGAG TGGGTCCCTG CAGAGCTTCG AAGCTCAGTT CGCCATGTCC ATGGAGAAGA TGGGGAGGAT TAATGTGATG ACAGGGACAC AAGGGGAAAT TCGGGGGAAC 
TGTGCGGTCA CGAACAGTTG A 

Retrieve as FASTA