Entry information : CcampPrx39(Cuscam_OOIL01000132.1_FGenesh257.1)
Entry ID 16117
Creation 2020-01-11 (Christophe Dunand)
Last sequence changes 2020-01-11 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-01-18 (Christophe Dunand)
Peroxidase information: CcampPrx39(Cuscam_OOIL01000132.1_FGenesh257.1)
Name CcampPrx39(Cuscam_OOIL01000132.1_FGenesh257.1)
Class Class III peroxidase    [Orthogroup: Prx009]
Taxonomy Viridiplantae (green plants); Streptophyta; Angiospermae; Eudicotyledons
Organism Cuscuta campestris    [TaxId: 132261 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CcampPrx39
start..stop
S start..stop
CcampPrx38 642 0 1..327 1..326
InPrx07 483 1e-173 1..327 4..328
PtPrx26 479 4e-172 5..327 7..328
PtPrx27 472 3e-169 7..327 9..327
Literature and cross-references CcampPrx39(Cuscam_OOIL01000132.1_FGenesh257.1)
Protein sequence: CcampPrx39(Cuscam_OOIL01000132.1_FGenesh257.1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   327
PWM (Da):   %s   35046.49  
PI (pH):   %s   7.94
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGSVWFLQIL CILGTAGPVL SQLQANFYTQ TCPNAESLIK DFVKTHISNA PSLAAPLLRM HFHDCFVRGC DGSVLLNRTR STGNQTEKVA PPNQTLRGFD FIDRVKGEVE KVCPGVVSCA  DVLALTARDA VVAIGGPSWN VPTGRRDGLF SNASEATNNI PAPTSNFTNL QTLFANQGLN LTDLVLLSGA HTIGVSHCSS FSARLYNFNG TNGSQDPALD SEYAANLRSN KCRSANDNTT 
RVEMDPGSFR TFDLGYYAQV LKRRGLFQSD AALLTSNATL ALVNALASGS LQSFEAQFAV SMEKMGRINV MTGTQGEIRR NCAVTNN 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Incorrect prediction from FGeneSH (exon 4 was not predicted).
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGCTCCG TTTGGTTTCT GCAGATTCTG TGCATTCTGG GAACCGCAGG CCCCGTTCTC TCCCAGTTGC AGGCCAATTT CTACACCCAA ACGTGCCCCA ATGCCGAGAG CCTCATCAAG  GACTTCGTCA AAACCCACAT TTCAAATGCC CCTTCTCTTG CTGCCCCCTT GCTCCGGATG CACTTCCACG ATTGCTTCGT CAGGGGGTGT GATGGGTCAG TGCTTCTGAA TAGGACGAGG  AGCACGGGGA ACCAGACGGA GAAGGTGGCT CCTCCGAACC AGACGCTGAG AGGGTTCGAC TTCATCGACA GGGTGAAGGG GGAGGTGGAG AAAGTGTGCC CCGGGGTCGT GTCGTGTGCC  GATGTTCTCG CTCTCACCGC CAGAGACGCC GTCGTCGCTA TTGGAGGGCC GTCATGGAAT GTCCCGACGG GTCGGCGGGA CGGATTGTTC TCAAACGCAT CGGAGGCGAC GAACAACATC  CCCGCCCCAA CCAGCAACTT CACTAACCTC CAGACACTCT TTGCCAACCA GGGTCTTAAC CTTACCGACC TCGTCCTCCT ATCTGGTGCA CACACGATCG GCGTATCGCA CTGCTCGTCG  TTCTCGGCCC GCCTTTACAA CTTCAACGGG ACGAACGGGT CCCAGGACCC GGCACTGGAC AGCGAGTACG CGGCCAACCT GAGGAGCAAC AAGTGCCGGT CGGCGAACGA CAACACGACG  AGGGTGGAGA TGGACCCGGG GAGCTTCCGG ACATTCGATC TCGGGTACTA CGCCCAAGTC CTCAAGAGGA GGGGACTATT CCAGTCCGAC GCGGCGTTGT TGACCAGCAA CGCCACGTTG  GCCCTAGTCA ATGCCCTCGC GAGTGGGTCC CTGCAGAGCT TCGAAGCTCA GTTCGCCGTG TCCATGGAGA AGATGGGGAG GATTAATGTG ATGACAGGGA CACAAGGGGA AATTCGGAGG 
AACTGTGCGG TCACGAACAA TTGA 

Retrieve as FASTA