Entry information : CcampPrx40(Cuscam_OOIL01000047.1_FGenesh278.1)
Entry ID 16118
Creation 2020-01-11 (Christophe Dunand)
Last sequence changes 2020-01-11 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-01-15 (Christophe Dunand)
Peroxidase information: CcampPrx40(Cuscam_OOIL01000047.1_FGenesh278.1)
Name CcampPrx40(Cuscam_OOIL01000047.1_FGenesh278.1)
Class Class III peroxidase    [Orthogroup: Prx029]
Taxonomy Viridiplantae (green plants); Streptophyta; Angiospermae; Eudicotyledons
Organism Cuscuta campestris    [TaxId: 132261 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CcampPrx40
start..stop
S start..stop
CcampPrx44 664 0 1..347 1..346
MguPrx13 442 7e-157 37..344 42..345
PtPrx07 441 2e-156 8..346 14..345
RcPrx49 437 6e-155 5..347 18..354
Literature and cross-references CcampPrx40(Cuscam_OOIL01000047.1_FGenesh278.1)
Protein sequence: CcampPrx40(Cuscam_OOIL01000047.1_FGenesh278.1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   347
PWM (Da):   %s   38109.54  
PI (pH):   %s   9.69
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MPISYTPFVF FVLFLSSPSQ ANRKPNSGTR QPPPPRQFSV DFYAESCPHL DRIVASVTTK QYKQAPAVGP ATIRLFFHDC FVQGCDASIL ISIKEMAERD AEENKDLSQY AFDAISEVKS  AVKTNCPAAA LSCADILAIA ARDFVHLVGG PYYQVKKGRQ DGNTSMASRV EPNLPRANST LDQLLKLFGS KGLSLKDLVV LSGAHSIGFA HCKQFVSRLY NYSIKGTNNQ THRSSTTIMD 
PRLLKALRMS CPKFGGNANV LIPFDVETPF VLDNAYYGNL EAKMGLLASD QALFLDRRSR PLVQMLAKDK KKFHDKFALA MEKMGSIGVE RGRIHGVGRK DCATPTS 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Incorrect prediction from FGeneSH (Exon 1 and start of exon 2 were not predicted)
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGCCAATCT CTTACACTCC ATTTGTATTC TTTGTCCTCT TCCTCTCCTC CCCATCTCAG GCCAATCGGA AACCGAATTC CGGCACACGG CAGCCGCCCC CGCCGCGGCA GTTCTCCGTC  GACTTCTACG CCGAATCATG CCCTCACCTG GATCGGATCG TCGCCTCCGT CACCACCAAG CAGTACAAAC AAGCGCCGGC GGTTGGACCC GCCACCATTC GCCTCTTCTT CCACGACTGC  TTTGTCCAGG GGTGTGACGC ATCAATATTG ATATCAATTA AGGAAATGGC AGAGAGAGAT GCAGAGGAAA ACAAGGACCT TTCACAATAT GCTTTTGATG CCATATCTGA GGTCAAATCG  GCGGTGAAAA CCAACTGCCC GGCCGCCGCC TTGTCCTGCG CCGACATCCT CGCCATTGCC GCCAGAGATT TTGTTCACCT TGTAGGAGGG CCATACTACC AAGTGAAGAA AGGAAGGCAG  GATGGAAATA CATCCATGGC TTCAAGGGTT GAACCAAACC TTCCGAGAGC CAACTCCACG CTCGACCAGC TTCTCAAACT CTTTGGTTCG AAAGGGCTGT CGCTGAAGGA CTTGGTTGTC  CTCTCGGGGG CTCACTCCAT CGGTTTCGCG CATTGCAAGC AATTTGTAAG CAGACTTTAT AACTACTCCA TAAAGGGCAC TAATAACCAA ACACACCGTT CATCGACAAC GATAATGGAC  CCTAGGCTTC TTAAAGCCCT AAGAATGTCT TGCCCGAAAT TCGGGGGGAA TGCCAATGTT CTGATCCCAT TCGATGTCGA AACCCCTTTC GTGCTCGACA ACGCTTACTA CGGGAACTTG  GAGGCCAAGA TGGGGTTGCT GGCTTCGGAT CAGGCGTTGT TTTTGGATAG GAGGAGTAGG CCTTTGGTCC AAATGCTGGC CAAGGATAAG AAGAAGTTCC ATGACAAGTT TGCTTTGGCT 
ATGGAGAAAA TGGGATCTAT TGGTGTGGAG AGGGGGAGAA TACATGGGGT TGGAAGAAAA GATTGTGCCA CCCCAACGTC TTGA 

Retrieve as FASTA