Entry information : CcampPrx45(Cuscam_OOIL01000120.1_FGenesh665.1)
Entry ID 16123
Creation 2020-01-11 (Christophe Dunand)
Last sequence changes 2020-01-11 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-01-15 (Christophe Dunand)
Peroxidase information: CcampPrx45(Cuscam_OOIL01000120.1_FGenesh665.1)
Name CcampPrx45(Cuscam_OOIL01000120.1_FGenesh665.1)
Class Class III peroxidase    [Orthogroup: Prx028]
Taxonomy Viridiplantae (green plants); Streptophyta; Angiospermae; Eudicotyledons
Organism Cuscuta campestris    [TaxId: 132261 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CcampPrx45
start..stop
S start..stop
CcampPrx46 653 0 3..348 2..347
InPrx02 528 0 11..348 3..334
MguPrx10 454 8e-162 21..348 1..332
LePrx49 449 8e-160 9..348 5..343
Literature and cross-references CcampPrx45(Cuscam_OOIL01000120.1_FGenesh665.1)
Protein sequence: CcampPrx45(Cuscam_OOIL01000120.1_FGenesh665.1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   348
PWM (Da):   %s   37602.13  
PI (pH):   %s   4.21
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MYYYYYYCHL LFLGLMMMMM MMNNVWGVNS SMNTLNETCF DGATATFILR LGLYRDVCPE AEAIVFSWVE TAVYDDPRMA ASLLRLHFHD CFVNGGCDAS VLLDDTPSMV GEKTAGPNQN  SLRGFEVIDS IKADLEYVCP QTVSCADILA IAARDAVLLS GGPAWEVEMG RKDSLRASQT DANNNIPGPN SDVPTLVSKF QALGLSPLDM VTLSGAHTLG KARCFTFNSR LNAGGGAPDV 
NLEFIQSLQQ LCSPAADVNA TLADLDAVTP ATFDNEYYVN LVSGKGLLAS DDVLVNGGED QTRAVVESYV DDPALFFDNF KSSMVKMGRL APAEGEGGEI RRNCRAVN 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Incorrect prediction from FGeneSH (extra seq between exons 1 and 2)
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGATGAATA ATGTTTGGGG AGTGAATAGC TCAATGAATA CCCTAAATGA GACATGCTTT GATGGTGCCA CTGCCACCTT CATACTGAGG TTGGGTCTCT ACAGGGACGT CTGCCCCGAG  GCTGAGGCCA TCGTCTTCTC TTGGGTCGAA ACCGCTGTTT ACGACGACCC CAGAATGGCC GCCTCTCTCC TCCGCCTCCA CTTCCACGAC TGCTTTGTCA ATGCAAGTTC CATTTCGTCA  TATTTCCCTC TCCGCGCACC CTATCGTTGT TTTTTAAAAA AATGTATATC CGGGTTGGGG TCGGGCCGGG ATGAGCTAGG GTTTGTAGGG GGTCAGGGAG GAGTAGAAAC TATTTCGGGG  TCGAACAGAT TAGATGCGAC CATGGAAAGG TATGAATGCC GTGATAGGAT GACGACAATG ATACCGAGGG GGATTTGAAC ATTAATTTGA CGTTTTTTAA GGGAAGGACC GGAGGAGGGA  GTGTGTTATT TTACACTTTT GACCTTCAAA TGAGCGCGTA CATTTGAGTC CCGGGATGCC CTTTTCGTCT TAATTAGTTA CAATTGGCGT TTGGCGCGAC GCGCGTATGC ATTATTGAGA  CGTTGGGTGT TGATGAATAA TGTGTGCAGG GGTGCGACGC GTCGGTGTTG CTGGACGACA CGCCGAGCAT GGTGGGGGAG AAAACAGCGG GACCGAACCA GAACTCTCTA AGGGGGTTTG  AAGTGATAGA CTCGATAAAG GCGGATCTCG AATACGTGTG CCCTCAAACC GTGTCTTGCG CTGACATTCT TGCCATTGCT GCCCGGGATG CCGTCCTCCT GGTATATCGT ATCGTATCAT  ATTCAATTTT TTGGCATGAA CTATTCTTTA ATTTCTTAGC TAAAGCTTAT TAATAATTCC CACAACTAAC CAAATTAAGA GTGCTAATTG AATGGGGTCT GTTTGGGTGG GCGTTATAAA  TTTCACGCAG TCAGGTGGTC CGGCATGGGA AGTGGAAATG GGAAGAAAGG ACAGTTTGAG AGCCAGCCAA ACAGACGCTA ACAACAACAT CCCGGGGCCC AATTCCGATG TTCCAACTTT  AGTGTCCAAG TTTCAAGCCC TTGGCCTCTC CCCACTTGAC ATGGTCACTC TTTCCGGTAT TCCATCTTTA TTTTCATCAT ACTGTTATTT CTTCAAGAAA TTTATTTAAA TAGCACTAAA  ATATAATGAT TTTCTCTAAA TAGTATCATA TGTGTTTTTT TTCCAATGTA GCACTATTAG TCATTATTCA CGTAAACGTT CGTCATCACT AGACATTATA GACATTATTA ATTGCTATTT  AGAGAATGAA ACAGGTTTAG TGTCACTTTG GAAAATAACT TAAGTTTTAG TGTTATTTAA TGTAAATATC CCCTTTTATT ATACTTCTTT CGTCCCTGAA AACTCTTCTT GTTTTGACTT  TTTTAATCAA ACAATGATAT TCTTTGACAT TACATTAAAC ATAATCTAAA TAAATAAATG TTATAAAATT TAGATATATC AAAACTATAC ACTAAGATGA AATTAATTAT ATTAAATTTA  TATTATAATT CAATATACCT TTCTCACAAT TTGTAGTTAA AATTGAAAAG TTTTCGGGAT GGAGAAAATG AAATTTTTGT GATTATGTTA TTTCTCTTTC TTCTATACAA ACTACAATCA  CACAAGTTCT ACTTTATTAA AGCGTGTCAA TTCCATTCAA AAAAGTCCGT CCTGAAATGT TCTATCCACT TACTATTCAC ACGGTCAAAT TTTAATCAAT TTCTTTACAT ATTTTCATTA  TGTATTTGAT AAAATAATAT ATTCTTGTCA CCACTTGTTT TGTAGAACTT TTGATGTAGT TTTTAAATAT ATAAATTTTA TTTTTTAATT TTACACCTAC AATCAAATAA ATTGAATTAA  AAATAAAGTC AATCAAACTT CGTAAACATA ACCGGGAAGA ACATTATAGG ACGGAGGGAG TATGAGACAG ATAGAATACT TATTTTCTGG TAGTCTCATT TTTTCTTCTC CCAAAAATTT  AGCATTAACA CTTTTATAAT TTTTTATCAG TGTAAATTAA TTTTGAAAAC GATAAAGTCA ATGTTGATAT TCTTTTTTTA TAAACATGAT GGGACATGCA GGGGCACACA CCCTAGGAAA  GGCGAGGTGT TTCACGTTCA ACTCCCGGCT CAACGCCGGC GGCGGCGCGC CGGACGTCAA CTTGGAGTTC ATTCAGTCCC TCCAGCAGCT CTGCTCCCCG GCGGCGGACG TGAACGCCAC  GCTGGCGGAT CTCGACGCCG TGACGCCAGC AACCTTCGAC AACGAGTACT ACGTCAACCT CGTGTCCGGG AAGGGCTTGC TGGCGTCGGA CGACGTGCTG GTCAACGGCG GCGAAGACCA  GACACGTGCG GTGGTCGAGT CGTACGTCGA CGACCCGGCG TTGTTCTTCG ACAACTTCAA GAGCTCAATG GTGAAGATGG GAAGGCTGGC GCCTGCTGAA GGAGAAGGCG GCGAGATACG 
CCGGAATTGT AGGGCTGTTA ATTAATTAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGATGAATA ATGTTTGGGG AGTGAATAGC TCAATGAATA CCCTAAATGA GACATGCTTT GATGGTGCCA CTGCCACCTT CATACTGAGG TTGGGTCTCT ACAGGGACGT CTGCCCCGAG  GCTGAGGCCA TCGTCTTCTC TTGGGTCGAA ACCGCTGTTT ACGACGACCC CAGAATGGCC GCCTCTCTCC TCCGCCTCCA CTTCCACGAC TGCTTTGTCA ATGGGTGCGA CGCGTCGGTG  TTGCTGGACG ACACGCCGAG CATGGTGGGG GAGAAAACAG CGGGACCGAA CCAGAACTCT CTAAGGGGGT TTGAAGTGAT AGACTCGATA AAGGCGGATC TCGAATACGT GTGCCCTCAA  ACCGTGTCTT GCGCTGACAT TCTTGCCATT GCTGCCCGGG ATGCCGTCCT CCTGTCAGGT GGTCCGGCAT GGGAAGTGGA AATGGGAAGA AAGGACAGTT TGAGAGCCAG CCAAACAGAC  GCTAACAACA ACATCCCGGG GCCCAATTCC GATGTTCCAA CTTTAGTGTC CAAGTTTCAA GCCCTTGGCC TCTCCCCACT TGACATGGTC ACTCTTTCCG GGGCACACAC CCTAGGAAAG  GCGAGGTGTT TCACGTTCAA CTCCCGGCTC AACGCCGGCG GCGGCGCGCC GGACGTCAAC TTGGAGTTCA TTCAGTCCCT CCAGCAGCTC TGCTCCCCGG CGGCGGACGT GAACGCCACG  CTGGCGGATC TCGACGCCGT GACGCCAGCA ACCTTCGACA ACGAGTACTA CGTCAACCTC GTGTCCGGGA AGGGCTTGCT GGCGTCGGAC GACGTGCTGG TCAACGGCGG CGAAGACCAG  ACACGTGCGG TGGTCGAGTC GTACGTCGAC GACCCGGCGT TGTTCTTCGA CAACTTCAAG AGCTCAATGG TGAAGATGGG AAGGCTGGCG CCTGCTGAAG GAGAAGGCGG CGAGATACGC 
CGGAATTGTA GGGCTGTTAA TTAA 

Retrieve as FASTA