Entry information : CcampPrx46(Cuscam_OOIL01000014.1_FGenesh497.1)
Entry ID 16124
Creation 2020-01-11 (Christophe Dunand)
Last sequence changes 2020-01-11 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-01-15 (Christophe Dunand)
Peroxidase information: CcampPrx46(Cuscam_OOIL01000014.1_FGenesh497.1)
Name CcampPrx46(Cuscam_OOIL01000014.1_FGenesh497.1)
Class Class III peroxidase    [Orthogroup: Prx027]
Taxonomy Viridiplantae (green plants); Streptophyta; Angiospermae; Eudicotyledons
Organism Cuscuta campestris    [TaxId: 132261 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CcampPrx46
start..stop
S start..stop
CcampPrx45 652 0 7..347 8..348
InPrx02 526 0 10..347 3..334
MguPrx10 456 2e-162 20..347 1..332
LePrx49 447 5e-159 1..347 4..343
Literature and cross-references CcampPrx46(Cuscam_OOIL01000014.1_FGenesh497.1)
Protein sequence: CcampPrx46(Cuscam_OOIL01000014.1_FGenesh497.1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   347
PWM (Da):   %s   37349.06  
PI (pH):   %s   4.31
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MYYYYYCHLL FLGLMMTMMM MNNVWGVNKS NNTLNETCFD GATATFILRL GLYRDVCPEA EAIVFSWVET AVYNDPRMAA SLLRLHFHDC FVNGCDSSVL LDDTPSMVGE KTAGPNQNSL  RGFEVIDSIK ADLEYVCPQT VSCADILAIA ARDAVLLSGG PAWEVEMGRK DSLRASQTDA NNNIPGPNSD VPTLVSKFQA LGLSPLDMVT LSGAHTLGKA RCFTFNSRLN AGGGAPDVNV 
EFIQSLQQLC SPAADANATL ADLDAVTPAT FDNQYYANLV SGKGLLASDD VLVNGGDDQT RAAVESYVDD PALFFDNFKS SMVKMGRLAP ADGEGGGEIR RNCRVVN 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Incorrect prediction from FGeneSH (intron 1 not predicted => GC GG)
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGTACTACT ACTACTACTG TCACTTGTTG TTCTTGGGGT TGATGATGAC CATGATGATG ATGAATAATG TTTGGGGAGT GAATAAGTCA AATAATACCC TAAATGAGAC ATGCTTTGAT  GGTGCCACAG CCACCTTCAT ATTGAGGTTG GGTCTCTACA GGGACGTCTG CCCGGAGGCG GAGGCCATCG TCTTCTCTTG GGTCGAAACC GCCGTTTACA ACGACCCCAG AATGGCCGCC  TCTCTCCTCC GCCTCCACTT CCACGACTGC TTTGTCAATG GGTGCGACTC GTCGGTGTTG TTGGACGACA CGCCGAGCAT GGTGGGGGAG AAAACCGCGG GACCGAACCA GAACTCTCTG  AGGGGGTTTG AAGTGATAGA TTCCATAAAG GCGGATCTCG AATACGTGTG CCCTCAAACG GTGTCTTGTG CTGACATTCT TGCCATTGCT GCCCGGGATG CCGTCCTCCT GTCGGGTGGT  CCGGCATGGG AGGTGGAAAT GGGAAGAAAA GACAGTTTGA GAGCCAGCCA AACAGACGCT AACAACAACA TTCCGGGACC CAATTCCGAT GTTCCAACTT TAGTGTCCAA GTTTCAAGCC  CTTGGCCTCT CCCCATTAGA CATGGTCACT CTTTCCGGGG CGCACACACT AGGAAAGGCG AGGTGTTTCA CGTTCAACTC CCGGCTCAAC GCCGGCGGCG GCGCGCCGGA CGTCAACGTG  GAGTTCATCC AGTCGCTCCA GCAGCTCTGC TCCCCGGCGG CGGACGCGAA CGCCACGCTG GCGGATCTCG ACGCCGTGAC GCCGGCGACC TTCGACAACC AGTACTACGC CAACCTCGTG  TCCGGGAAGG GCTTGCTGGC GTCGGACGAC GTGCTGGTCA ACGGCGGCGA CGACCAGACG CGCGCGGCGG TCGAGTCGTA CGTCGACGAC CCGGCGCTGT TCTTTGACAA CTTCAAGAGC 
TCGATGGTGA AGATGGGAAG GCTAGCGCCT GCTGACGGAG AAGGCGGCGG CGAGATACGC CGGAATTGTA GGGTTGTTAA TTAA 

Retrieve as FASTA