Entry information : CcampPrx83(Cuscam_OOIL01000048.1_FGenesh256.1)
Entry ID 16161
Creation 2020-01-11 (Christophe Dunand)
Last sequence changes 2020-01-11 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-01-18 (Christophe Dunand)
Peroxidase information: CcampPrx83(Cuscam_OOIL01000048.1_FGenesh256.1)
Name CcampPrx83(Cuscam_OOIL01000048.1_FGenesh256.1)
Class Class III peroxidase    [Orthogroup: Prx002]
Taxonomy Viridiplantae (green plants); Streptophyta; Angiospermae; Eudicotyledons
Organism Cuscuta campestris    [TaxId: 132261 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CcampPrx83
start..stop
S start..stop
CcampPrx82 658 0 26..345 27..346
NtPrx60-1B 612 0 10..345 7..326
InPrx01 609 0 1..345 3..331
NtPrx60-1A 604 0 21..345 15..326
Literature and cross-references CcampPrx83(Cuscam_OOIL01000048.1_FGenesh256.1)
Protein sequence: CcampPrx83(Cuscam_OOIL01000048.1_FGenesh256.1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   345
PWM (Da):   %s   38929.07  
PI (pH):   %s   9.3
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGSTTTSLSF FFVFLLLAAP SRLSAFAEDQ QPINRDDGPR PAAAGLALNY YRDTCPQAED IIREQVKLLY KRHKNTAFSW LRNIFHDCFV QSCDASLLLD STRRSLSEKE TDRSFGMRNF  RYIETIKEAV ERECPGVVSC ADILVLSARD GIVALGGPYI SLKTGRRDGR KSRADILEQH LPDHNESMSV VLDRFSKVGI NTPGVVALLG AHSVGRTHCV KLVQRLYPEV DPELNPDHVP 
HMLKKCPDPI PDPKAVQYVR NDRGTPMKLD NNYYRNILEN KGLMLVDHQL AKDKRTKPYV KKMAKNQDYF FKEFSRAITI LSENNPLTGT KGEIRKQCNL ANKLH 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Incorrect prediction from FGeneSH (Exon 1 was not correctly predicted)
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGTTCAA CAACAACATC TCTCTCCTTC TTCTTCGTCT TCCTCCTCCT GGCAGCCCCA TCACGTCTCT CTGCGTTTGC AGAAGATCAA CAGCCCATCA ACAGAGACGA TGGTCCTCGT  CCGGCAGCAG CAGGGCTCGC CTTGAACTAC TACAGAGACA CATGCCCCCA AGCCGAAGAC ATCATCAGAG AGCAGGTCAA GCTTCTCTAC AAGCGCCACA AGAACACCGC CTTTTCTTGG  CTCAGGAACA TCTTCCACGA CTGCTTTGTC CAGTCTTGTG ATGCTTCTCT GCTTCTGGAC TCCACCCGGC GGTCTCTGTC CGAGAAGGAG ACCGACCGGA GCTTCGGGAT GAGGAATTTC  AGGTACATCG AGACTATCAA AGAAGCTGTG GAGAGGGAGT GCCCCGGAGT TGTTTCCTGT GCCGACATTC TTGTCCTGTC CGCCAGAGAT GGCATTGTTG CTCTTGGAGG ACCATACATC  TCACTGAAAA CAGGGAGAAG GGATGGGAGG AAGAGCAGAG CAGATATTCT GGAGCAACAT CTCCCAGACC ACAACGAAAG CATGAGTGTT GTTCTTGACA GGTTCTCCAA AGTCGGAATC  AACACTCCCG GAGTTGTCGC TTTACTAGGA GCTCACAGTG TGGGAAGAAC CCACTGTGTG AAGCTGGTGC AGAGATTATA CCCAGAGGTG GACCCGGAGC TGAACCCGGA TCATGTCCCA  CACATGCTCA AGAAATGCCC AGACCCAATC CCAGACCCAA AGGCAGTGCA GTATGTGAGG AATGACAGGG GCACCCCTAT GAAGCTGGAC AACAACTACT ACAGGAACAT TCTTGAAAAC  AAAGGGCTCA TGCTTGTGGA CCACCAACTG GCCAAGGACA AGAGGACCAA GCCCTATGTC AAGAAGATGG CCAAGAACCA GGATTACTTC TTCAAGGAGT TCTCCAGAGC CATCACCATT 
CTCTCCGAGA ACAACCCCCT CACGGGCACC AAAGGAGAGA TCCGAAAGCA ATGCAATCTT GCCAACAAGC TCCACTAG 

Retrieve as FASTA