Entry information : AgluRboh05(Alnglu_Alngl14400S16381 5' / Alnglu_Alngl19762S19420 3')
Entry ID 16264
Creation 2020-01-28 (Christophe Dunand)
Last sequence changes 2020-03-22 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-05-13 (Christophe Dunand)
Peroxidase information: AgluRboh05(Alnglu_Alngl14400S16381 5' / Alnglu_Alngl19762S19420 3')
Name AgluRboh05(Alnglu_Alngl14400S16381 5' / Alnglu_Alngl19762S19420 3')
Class Respiratory burst oxidase homolog    [Orthogroup: Rboh001]
Taxonomy Viridiplantae (green plants); Streptophyta; Angiospermae; Eudicotyledons
Organism Alnus glutinosa    [TaxId: 3517 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AgluRboh05
start..stop
S start..stop
CglaRboh05 1582 0 24..946 1..922
JregRboh07 1547 0 44..946 22..926
VvRboh07 1491 0 36..946 10..917
DgloRboh05 1470 0 24..946 1..927
Literature and cross-references AgluRboh05(Alnglu_Alngl14400S16381 5' / Alnglu_Alngl19762S19420 3')
Protein sequence: AgluRboh05(Alnglu_Alngl14400S16381 5' / Alnglu_Alngl19762S19420 3')
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   946
PWM (Da):   %s   106946.61  
PI (pH):   %s   8.61
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MSFCTAEIKQ TEEELNLPFG EKVMRLSSSS FGKGCSKRSN CSRAFEQLDD SEDDSGEHGV GGAMLPIFLN DLRRNDDHDT VEVTLELEED SIVVCSVTPT ATAATGEVEA EGFLARSLSV  TSRIRRKFPW LKSQSSSRTS VSDTEERNTI SARDARRIRA GLQRTKSSAQ QALKGLRFIN KSTGKGVCHA DELCRKVEAR FESLAKDGLL AREDFGECIG MGKESKEFAV GIFDALARRR  RQNIGKVTKE ELRDFWLQIS DQSFDARLQI FFDMADSNED GRITREEVQE LIMLSASANK LSKLKEQAEE YASLIMEELD PENLGYIELW QLETLLLQRD NYTNNSRPLS TASTVGWSQN  LSSFRPKNMM RRVTATIRCL ILENWRRGWI LLLWLIAMAG LFTWKFNQYR NRAAFQVLGY CLPTAKGAAE TLKLNMALIL VPVCRNTLTW LRSTRARSFV PFDDNINFHK VIAFAIVIGV  LLHAGTHMAC DFPRLINSSP EGFALIASDF GNKKPTYKDL VRGVEGVTGI SMVVLMAVSF TLATPQFRKN VVRLPAPFNR LTGFNAFWYS HHLLGIVYIL LLVHGTFLFF AHQWYQKTTW  MYVSVPLLLY IAERSVRTCR SEHYSVKISK ISVLPGNVFC LIMSKPQGFK YKSGQYIFLQ CPKISQFEWH PFSITSAPGD DYLSVHIRTV GDWTQELKRI FTEVDGLPSV IGRAKFSVFG  QVAQRGQPRL FVDGPYGAPA QDYKNYDVLL LVGLGIGATP FISILRDLLN NTRTEEPLDS NTDTTISVDS FNSFTSSNLT PGGRKKCQRA KNAYFYWVTR EPGSFEWFKG VMDEVAEMDH 
KGQIELHNYL TSVYEEHDAR STLITMVQAL NHAKHGVDIL SGTRVRTHFA RPNWDEVFTK IASRHPYATV GVFYCGMPVL AKELSKLSCE LSRKTSTRFE FHKEYF 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Two scafold borders assemblied based on orthologous seq
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGAGCTTCT GCACAGCAGA AATTAAGCAA ACAGAGGAGG AGTTGAATTT ACCTTTCGGA GAGAAAGTGA TGAGGTTGTC GTCGTCGTCT TTTGGAAAAG GCTGTTCGAA GCGGTCCAAT  TGTAGCCGCG CATTCGAACA ATTGGACGAC AGTGAAGACG ACTCCGGCGA ACATGGAGTC GGCGGAGCAA TGCTGCCGAT ATTTCTCAAC GACCTGAGAC GGAACGATGA TCATGACACA  GTCGAAGTCA CGCTGGAGCT CGAGGAAGAC TCCATTGTCG TCTGCAGCGT CACGCCGACG GCGACCGCGG CTACGGGAGA GGTAGAGGCG GAAGGATTTC TGGCGAGGAG CCTCTCCGTG  ACGTCGAGAA TCCGGAGGAA ATTCCCGTGG CTGAAATCGC AGTCGAGCTC GCGGACGTCG GTGTCGGATA CGGAGGAGCG CAACACGATA TCGGCCCGCG ACGCTCGCAG AATCAGAGCG  GGACTTCAAC GGACGAAATC GAGCGCACAG CAAGCTCTCA AAGGTCTGAG ATTCATCAAC AAAAGCACCG GGAAGGGAGT TTGCCACGCG GACGAGTTGT GCAGAAAAGT GGAGGCGAGG  TTCGAGTCCC TGGCCAAGGA CGGCTTGCTT GCTCGAGAAG ACTTCGGTGA ATGCATAGGG ATGGGGAAGG AGTCGAAGGA GTTTGCGGTG GGCATATTCG ACGCCTTGGC GCGGAGGAGG  AGACAGAACA TAGGGAAGGT CACAAAAGAA GAGCTTCGTG ACTTCTGGCT CCAGATTTCG GACCAGAGCT TCGACGCCCG CCTTCAGATC TTCTTCGACA TGGCGGATAG CAACGAGGAT  GGAAGAATTA CAAGGGAGGA AGTGCAAGAG CTTATAATGC TCAGCGCTTC TGCAAACAAG CTATCGAAGC TAAAAGAACA GGCAGAAGAA TATGCTTCAT TGATTATGGA AGAACTAGAT  CCAGAAAACC TCGGATATAT TGAGTTATGG CAGTTAGAAA CGCTGCTTCT ACAAAGAGAC AATTACACGA ACAACAGCAG ACCACTGAGC ACAGCAAGTA CTGTAGGGTG GAGTCAGAAC  CTCAGTTCCT TCAGGCCCAA GAATATGATG CGAAGAGTAA CCGCAACAAT CCGGTGTCTC ATACTAGAGA ATTGGCGGAG GGGTTGGATT TTACTTTTGT GGTTGATTGC CATGGCAGGC  CTTTTCACCT GGAAATTCAA CCAATACAGA AATAGGGCAG CATTTCAGGT CCTGGGTTAT TGCTTGCCGA CAGCCAAAGG GGCTGCAGAG ACTCTGAAGC TCAACATGGC TCTAATCCTC  GTACCAGTTT GTCGAAACAC GCTGACATGG CTTCGGTCCA CAAGAGCCAG GTCCTTTGTC CCCTTTGACG ACAATATTAA TTTCCACAAG GTGATTGCAT TTGCTATAGT AATTGGAGTG  CTCCTTCATG CGGGAACCCA TATGGCATGC GACTTTCCTC GCCTTATAAA CTCGTCTCCA GAAGGATTTG CCTTGATAGC TTCCGATTTC GGAAACAAAA AACCCACGTA CAAAGACCTA  GTGAGGGGTG TTGAAGGCGT GACTGGGATT TCCATGGTGG TTTTAATGGC CGTTTCATTC ACTCTAGCAA CACCTCAGTT CAGGAAAAAT GTGGTGAGGC TGCCTGCACC GTTCAACAGA  TTGACGGGCT TTAATGCATT TTGGTACTCC CATCACCTTC TGGGTATCGT CTACATTTTG CTGCTTGTTC ATGGAACCTT CTTGTTCTTT GCCCACCAGT GGTACCAGAA AACGACATGG  ATGTACGTCT CTGTTCCATT ATTGCTCTAC ATAGCAGAGC GGAGTGTACG AACGTGTAGA TCAGAGCATT ATTCAGTTAA AATATCCAAG ATTTCAGTGC TACCAGGAAA TGTTTTTTGT  TTAATCATGT CCAAGCCTCA AGGATTCAAG TACAAAAGTG GGCAGTACAT ATTTCTGCAA TGCCCAAAAA TCTCTCAATT TGAATGGCAT CCATTTTCCA TAACTTCAGC GCCAGGAGAT  GATTACCTAA GTGTTCACAT CCGTACTGTA GGAGATTGGA CGCAGGAATT GAAGCGAATT TTCACCGAGG TGGATGGTTT ACCATCTGTC ATTGGTCGAG CCAAATTTAG TGTATTCGGG  CAAGTGGCTC AGAGAGGCCA ACCCAGATTG TTTGTGGATG GCCCATATGG AGCTCCAGCG CAGGACTATA AAAACTATGA TGTCTTGCTA CTGGTTGGAC TTGGAATTGG GGCTACCCCT  TTTATAAGCA TCCTTAGAGA TCTTCTAAAC AATACAAGAA CAGAAGAACC ACTGGATTCG AACACAGACA CCACTATATC AGTTGACAGC TTCAATAGTT TTACATCTTC AAATTTGACA  CCGGGTGGAA GGAAGAAGTG TCAGAGAGCT AAAAATGCTT ATTTCTACTG GGTTACCAGG GAGCCCGGGT CCTTTGAATG GTTTAAAGGA GTAATGGACG AAGTAGCAGA AATGGATCAC  AAAGGTCAAA TTGAGCTTCA CAACTACCTT ACAAGTGTAT ACGAAGAACA CGATGCAAGG TCAACATTGA TCACAATGGT TCAAGCTCTC AACCATGCCA AACATGGTGT TGACATCCTA  TCTGGAACCC GAGTAAGGAC GCACTTTGCT AGGCCTAATT GGGATGAAGT GTTTACTAAA ATAGCTTCAA GGCATCCATA TGCAACAGTA GGGGTTTTCT ACTGTGGGAT GCCAGTTTTG 
GCAAAGGAGC TGAGTAAGCT ATCTTGCGAG CTGAGTCGCA AGACCTCCAC ACGCTTCGAG TTTCACAAGG AGTATTTTTG A 

Retrieve as FASTA