Entry information : PtaPrx01(PTA00050132)
Entry ID 1641
Creation 2007-02-13 (Christophe Dunand)
Last sequence changes 2007-02-13 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-12-28 (Christophe Dunand)
Peroxidase information: PtaPrx01(PTA00050132)
Name PtaPrx01(PTA00050132)
Class Class III peroxidase    [Orthogroup: Prx002]
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Pinus
Organism Pinus taeda (loblolly pine)    [TaxId: 3352 ]
Cellular localisation N/D
Tissue types Needles
Roots
Stems
Inducers Fusarium infection
Pathogen interaction
Repressor N/D
Best BLASTp hits
Perox score E-value PtaPrx01
start..stop
S start..stop
PpPrx01 705 0 1..342 1..342
PsiPrx01 653 0 1..342 1..342
PabPrx47 650 0 1..342 1..342
CruPrx01 559 0 36..337 24..325
Literature and cross-references PtaPrx01(PTA00050132)
Literature 1-Sederoff,R., Molecular Basis of Wood Formation in the Pine Megagenome, unpublished.
2-Pratt,L., Cordonnier-Pratt,M.M., Morse,A., Davis,J., Lorenz,W.W., Neale,D. and Dean,J.F.D. An EST database from pitch canker resistant loblolly pine (Pinus taeda) shoot tips
Cluster/Prediction ref. UniGene:   Pta.587
Protein sequence: PtaPrx01(PTA00050132)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   342 (322)
PWM (Da):   %s   38585.75 (36201.4)  
PI (pH):   %s   9.35 (9.10) Peptide Signal:   %s   cut: 21 range:21-342
Sequence
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGLWVVLALA LSAQLFQSQA YNVVSSSNAT GSYSENGLVM NYYGDSCPQA EEIIAEQVRL LYKRHKNTAF SWLRNIFHDC AVESCDASLL LDSTRKSISE KDTDRSFGLR NFRYLDTIKE  AVERECPGVV SCADILVLSA RDGVVSLGGP YIPLKTGRRD GRKSRADVVE NYLPDHNESI STVLSRFKAM GIDTRGVVAL LGAHSVGRTH CVKLVHRLYP EVDPTLDPGH VEHMKHKCPD 
AIPNPKAVQY VRNDRGTPMK LDNNYYVNLM NNKGLLIVDQ QLYADSRTRP YVKKMAKSQE YFFKYFFRAL TILSENNPLT GARGEIRRQC SLKNKLHTKN KR* 

Retrieve as FASTA  
Remarks Complete sequence from genomic and 174 ESTs.
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGGCTGT GGGTGGTGCT GGCGTTGGCG CTCAGCGCGC AGCTATTTCA GTCTCAGGCT TACAATGTGG TAAGTTCAAG CAATGCTACT GGGAGTTACA GTGAGAATGG ATTGGTGATG  AATTACTATG GGGACTCTTG CCCTCAGGCT GAAGAGATCA TTGCTGAACA AGTACGCCTG CTGTACAAAA GACACAAGAA CACTGCATTC TCATGGCTTA GAAATATTTT CCATGACTGT  GCTGTGGAGG TGAGCTTTCG TCAGATCTCT TCTACTATTA TATTCCAGTA ACATATACAT CTAAAGAACT CATTGGCTTT CGACTGGCCC GCTTGGGCCA GGTATTTGTT ATTGGATTAA  AGTAGCAAGT GGATATATGG TGAAGTATTC ACTGGAAACT TATGACATTG CAATTTTTTT AAGCTATTCG AGAAATAAAT TTACATTTTT TATTTTATTT TATCATTGAA TTTAGAGATT  ATTTTACAGC CACGTGTGAA GAAATGTGTA TTCTACCATC AAATAGGAAA AGATGAGTAA GTATGTCTTC CTACAGTTTT TTTTTAAAAA TAAAGATTGT GTTATAAATA GAAAAATAAT  GTGACTATAA TAAAAAAATG AATATGATAT AAAACAATTA GAATCTAAAG AAGTTTGAAC ACTAAGAAAT AGAAGTTTGA ACAAGAAAAA TTTTGATTTT ACTAAATTCA TGTTAGATCT  ATAGTTAAAA TAGATCTATA CTGGTAATTT CACAATAATT TTGTTGAATG TTAATTGATT AACTAACAAA GTGATACTTT TCTTAAATGG ACTGACTATT TCGTTCTGAT GACCGCCTTC  ATCTTATCTT ACTACCAAAT TCCAACAGTT TCTCCTGCAT TTTACATTCC TAAGTAGGAA CATCATGTAT TTGCATTAGT TGCTGACACA TTTTGACAAA ATGTACTTGC ATTTGTTGCT  AACACAGTTT GTGTATCCGT TTAGTAACTA GTGGTGCTGT TACATTTTAT CCTACTGCCA ATAGTCCTCT TGCATTTTAC AATCCTAAGT AGGAACATGT ATTTCCATTA GTTGCTGACA  CATTTTGTCA AAATGTATTT GCATCGGTTG CTAACACAGT TTGTGTATGT TTAGTAACCA GTGTTGCTGT TGCATCTATT CCAGCTGTCA ATAGTTCTCT GGTTTTAGAA TCCTAAGAAG  TAGGGATGAC ATGGATTTGG ATTTGTTGCT AATATATTAA ATATATTTTA TCTGTTAACT TGGAATGTGC AGTCATGTGA TGCATCGCTT CTGTTGGACT CAACAAGGAA GAGCATATCA  GAAAAGGACA CTGACAGGAG CTTCGGCCTC CGCAACTTTA GGTATTTGGA TACCATCAAG GAAGCCGTGG AGAGGGAGTG CCCCGGGGTC GTTTCCTGTG CAGATATACT CGTTCTCTCT  GCCAGAGATG GCGTTGTATC GGTAGGTGCA TAAATATACG AAATGCATAC AGAGAAAGGG GATATATACA ATGTATATAT TTTTTAAACT AATGTTCAGG GTTTACAATG TATATATGTA  CACTTAAATT TAGTATTTAC CAATGTACTT AGGTTTAGGA TTTAAATGTA TATAAGGTCA TTCTGAATTT CAGAAATATA TCAGATTTGT AAATTTCAGA AACATTTTAA ATCTGACCCA  CAAAAGTGAG AATTTTTATA TCCATAAAAG TGAGAAATTT TTTTTCCTTT ATGTGGATTA AGGTGAGGTT TTCTTTTGGC TGTCTATTCC CAAAAAGATC TATTGTTAAA TTTTGGATAA  TGTTGAAAAA AAAATCTGGA TAATGTTGAA AAATAGGTAA AGTTAGTTTG TTTTTTTCTC TTTGAAAAAT AAAGCAAGAT TTTATTTATT TATTTnnnnn nnnnnnnnnn nnnnnATTTA  TTTCAAAAAA TATTTTATCT ATTAAATTTC AAAAATATTA TCTATTCTAT TCCAAAATAT TCTTAAAATC CGTAATCCAT ACCATGTCAG TGCACATATA TAGCCCTGCT GATCTGATGT  GTTCACTGAT TTTGGACTAT TAAATGGTTT ACCAATATGT AGTTGGGAGG GCCATACATT CCCCTGAAGA CGGGAAGAAG AGATGGACGG AAGAGCAGAG CAGATGTGGT GGAGAATTAC  CTGCCCGATC ACAATGAGAG CATCTCCACT GTTCTGTCTC GCTTCAAAGC CATGGGAATC GACACCCGTG GGGTTGTTGC ACTGCTGGGT GAGTCCAGAT CTAAATCTAT AAGTATTTAA  TTTTATAGGG TATTTTTATG TTGATGGTGT ATTTTTGGAA TATTTTAGAA ACCAACATAT ATGGCTGAGT GAGTGAGCAG ATTTAAATCC ATAATCTTTT ATGTGTGATT CCTGAAATAT  TTTGAAATCT GAATTGTAAT GATTCTGAAA TATTCCAAAA ATCCACGATC ACTTGAATTT TATGCAGTAG CTACTGCTGA TCACATGATT TATGATTTTG GAAAAAATAT TGCAGGGGCT  CACAGCGTGG GGAGGACTCA CTGCGTGAAG CTGGTGCACA GGCTGTACCC GGAAGTAGAT CCGACACTGG ACCCTGGGCA CGTGGAGCAC ATGAAGCACA AGTGCCCGGA CGCGATCCCC  AACCCGAAGG CAGTGCAGTA TGTGCGGAAC GACCGGGGAA CGCCTATGAA GCTGGACAAC AACTACTACG TGAACCTGAT GAACAACAAG GGGCTTCTCA TAGTGGATCA GCAACTGTAT  GCAGATTCGA GGACCAGGCC GTATGTGAAG AAGATGGCAA AAAGCCAGGA ATACTTCTTC AAATACTTCT TCCGGGCGCT CACCATCCTC TCTGAGAACA ATCCTCTCAC CGGCGCTCGA 
GGAGAAATCC GTAGGCAGTG TTCGCTCAAA AACAAATTGC ACACAAAAAA CAAGCGTTGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGGCTGT GGGTGGTGCT GGCGTTGGCG CTCAGCGCGC AGCTATTTCA GTCTCAGGCT TACAATGTGG TAAGTTCAAG CAATGCTACT GGGAGTTACA GTGAGAATGG ATTGGTGATG  AATTACTATG GGGACTCTTG CCCTCAGGCT GAAGAGATCA TTGCTGAACA AGTACGCCTG CTGTACAAAA GACACAAGAA CACTGCATTC TCATGGCTTA GAAATATTTT CCATGACTGT  GCTGTGGAGT CATGTGATGC ATCGCTTCTG TTGGACTCAA CAAGGAAGAG CATATCAGAA AAGGACACTG ACAGGAGCTT CGGCCTCCGC AACTTTAGGT ATTTGGATAC CATCAAGGAA  GCCGTGGAGA GGGAGTGCCC CGGGGTCGTT TCCTGTGCAG ATATACTCGT TCTCTCTGCC AGAGATGGCG TTGTATCGTT GGGAGGGCCA TACATTCCCC TGAAGACGGG AAGAAGAGAT  GGACGGAAGA GCAGAGCAGA TGTGGTGGAG AATTACCTGC CCGATCACAA TGAGAGCATC TCCACTGTTC TGTCTCGCTT CAAAGCCATG GGAATCGACA CCCGTGGGGT TGTTGCACTG  CTGGGGGCTC ACAGCGTGGG GAGGACTCAC TGCGTGAAGC TGGTGCACAG GCTGTACCCG GAAGTAGATC CGACACTGGA CCCTGGGCAC GTGGAGCACA TGAAGCACAA GTGCCCGGAC  GCGATCCCCA ACCCGAAGGC AGTGCAGTAT GTGCGGAACG ACCGGGGAAC GCCTATGAAG CTGGACAACA ACTACTACGT GAACCTGATG AACAACAAGG GGCTTCTCAT AGTGGATCAG  CAACTGTATG CAGATTCGAG GACCAGGCCG TATGTGAAGA AGATGGCAAA AAGCCAGGAA TACTTCTTCA AATACTTCTT CCGGGCGCTC ACCATCCTCT CTGAGAACAA TCCTCTCACC 
GGCGCTCGAG GAGAAATCCG TAGGCAGTGT TCGCTCAAAA ACAAATTGCA CACAAAAAAC AAGCGTTGA 

Retrieve as FASTA