Entry information : PtaPrx01
Entry ID 1641
Creation 2007-02-13 (Christophe Dunand)
Last sequence changes 2007-02-13 (Christophe Dunand)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2008-06-19 (Christophe Dunand)
Peroxidase information: PtaPrx01
Name PtaPrx01
Class Class III peroxidase    [Orthogroup: Prx001]
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Pinus
Organism Pinus taeda (loblolly pine)    [TaxId: 3352 ]
Cellular localisation N/D
Tissue types Needles
Roots
Stems
Inducers Fusarium infection
Pathogen interaction
Repressor N/D
Best BLASTp hits
Perox score E-value PtaPrx01
start..stop
S start..stop
PpPrx01 707 0 1..342 1..342
PsiPrx01 649 0 1..342 1..342
PabPrx47 647 0 1..342 1..342
CruPrx01 559 0 36..337 24..325
Literature and cross-references PtaPrx01
Literature 1-Sederoff,R., Molecular Basis of Wood Formation in the Pine Megagenome, unpublished.
2-Pratt,L., Cordonnier-Pratt,M.M., Morse,A., Davis,J., Lorenz,W.W., Neale,D. and Dean,J.F.D. An EST database from pitch canker resistant loblolly pine (Pinus taeda) shoot tips
Cluster/Prediction ref. UniGene:   Pta.587
Protein sequence: PtaPrx01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   342 (322)
PWM (Da):   %s   38211.5 (36201.4)  
PI (pH):   %s   9 (9.10) Peptide Signal:   %s   cut: 21 range:21-342
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGLCVVLALA LSAQLLQSQA YNVVSSSNAT GSYSENGLVM NYYGDSCPQA EEIIAEQVRL LYKRHKNTAF SWLRNIFHDC AVESCDASLL LDSTRNSISE KDTDRSFGLR NFRYLDTIKE  AVERECPGVV SCADILVLSA RDGVVSLGGP YIPLKTGRRD GRKSRADVVE NYLPDHNESI STVLSRFKAM GIDTRGVVAL LGAHSVGRTH CVKLVHRLYP EVDPTLDPGH VEHMKHKCPD 
AIPNPKAVQY VRNDRGTPMK LDNNYYVNLM NNKGLLIVDQ QLYADSRTRP YVKKMAKSQE YFFKYFSRAL TILSENNPLT GARGEIRRQC SLKNKLHTKS KR 

Retrieve as FASTA  
Remarks Complete sequence from 174 ESTs.