Entry information : MePrx05
Entry ID 1664
Creation 2008-06-19 (Christophe Dunand)
Last sequence changes 2011-11-30 (Christophe Dunand)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2011-12-08 (Qiang Li)
Peroxidase information: MePrx05
Name MePrx05
Class Class III peroxidase    [Orthogroup: Prx001]
Taxonomy Eukaryota Viridiplantae Streptophyta Euphorbiaceae Manihot
Organism Manihot esculenta (cassava)    [TaxId: 3983 ]
Cellular localisation N/D
Tissue types Roots
Seedlings
Stems
Inducers Pathogen interaction
Xanthomonas infection
Repressor N/D
Best BLASTp hits
Perox score E-value MePrx05
start..stop
S start..stop
PtrePrx01 637 0 1..332 1..331
PtremPrx01 637 0 1..332 1..331
PtralPrx01 635 0 1..332 1..331
PtPrx02 633 0 1..332 1..331
Literature and cross-references MePrx05
Literature Lopez,C., Jorge,V., Piegu,B., Mba,C., Cortes,D., Restrepo,S., Soto ,M., Laudie,M., Berger,C., Cooke,R., Delseny,M., Tohme,J. and Verdier,V. A unigene catalogue of 5700 expressed genes in cassava
Plant Mol. Biol. 56 (4), 541-554 (2004).

Fregene,M., Terauchi,R., Clifton,S., Hillier,L., Marra,M., Pape,D., Wylie,T., Dante,M., Martin,J., Bowers,Y., Gibbons,M., Theisin,B., Ritter,E., Bennett,J., Jentes,E., Ronko,I., Tsagareishvili,R., Belaygorod,L., Franklin,C., Carr,L., Grow,A., Maguire,L., Richey,J. , Wadkins,J., Kennedy,S., Levinso,D., Waterston,B. and Wilson,R
WashU Cassava EST Project Unpublished (2001).

DNA ref. Phytozome 12:   scaffold06598 (92545..91225)
EST ref. GenBank:   CK642423 [3' end]   DV456066 [3' end]   DB938059 [Fragment]
Protein sequence: MePrx05
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   332 (308)
PWM (Da):   %s   37315.34 (34695.9)  
PI (pH):   %s   8.54 (8.21) Peptide Signal:   %s   cut: 25 range:25-332
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MVTKALFFFA LLSFSAVSLR TAFAEDEKDP GLVVNFYKDT CPQAEDIIRE QVKLLYKRHK NTAFSWLRNI FHDCGVQSCD ASLLLDSTRR TLSEKETDRS FGLRNFRYLE TIKEALEREC  PGVVSCADIL VLSARDGIVA LGGPHIPLKx TGRRDGRKSR AEVVEQYLPD HNESISVVLE RFAAMGIDTP GVVALLGSHS VGRTHCVKLV HRLYPEVDPE LNPNHVEHML YKCPDAIPDP 
KAVQYVRNDR GTPMILDNNY YRNILDNKGL LIVDHQLATD KRTKPYVKKM AKSQDYFFKE FAKAITILSE NNPLTGTKGE IRKQCNVANK LH 

Retrieve as FASTA  
Remarks Complete sequence from 4 EST sequences and genomic. No prediction from phytozome.
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGTTACCA AAGCTCTCTT CTTCTTTGCT TTATTATCTT TTTCAGCTGT TTCTCTCAGG ACAGCTTTTG CAGAAGATGA GAAAGATCCA GGTCTTGTTG TGAACTTCTA CAAGGACACG  TGCCCTCAAG CTGAAGACAT TATCAGAGAA CAAGTTAAGC TTCTGTACAA GAGACACAAG AACACTGCAT TTTCATGGCT AAGAAACATC TTCCATGACT GCGGTGTTCA GGTAATAAAC  TCTCTTTATC TCTTCTTCTC TCTTAAGATT TTTTTTTTTA TCTCTTGATG TGTTTTTTTG TTTTTTTTGT CGGGTAGTCA TGCGATGCTT CCTTGCTGCT GGATTCAACC AGGAGGACCT  TGTCTGAAAA GGAAACAGAC AGGAGCTTTG GCCTGAGGAA CTTCAGGTAC CTTGAAACGA TCAAAGAAGC TCTAGAAAGG GAGTGTCCTG GAGTTGTTTC CTGTGCAGAC ATCCTTGTAC  TATCTGCTAG AGATGGCATT GTTGCGGTAT TTCTCTCGTC CTTTTGTGAC GAAGTTTTAT TGGGAAAAAA ATCGCCACTA GAAAGTGCAT GTTCGCCACT AAAACTTTTA GCCTGGCAAC  TGCTAAATGT TTCAGTGGCA ATTTTTATCT ATGGCCACTA AAACTCTAAT TTCTTTTGGT TTTTTGGCCT TGTCGTTCTG TTAATTCATG GTGTTTCTTT TTCTTTTCTT ACTTTCTGGT  TAAGGATTTA ATCAACGTAA GCTAAAAGCT TTGTCGATTT CAGCTAGGAG GACCTCACAT TCCTCTAAAA AnnACTGGAA GAAGAGATGG AAGAAAAAGC AGAGCAGAAG TGGTCGAGCA  ATATCTGCCA GATCATAACG AGAGCATCTC TGTTGTTCTT GAGAGATTTG CTGCAATGGG TATCGACACC CCTGGAGTTG TCGCCTTGCT AGGTACACAT GCCACGTATC TCACATGCAA  ATTAATAGAC ATGAACCCAA GTGGCTTAAT CAACTATTAA CCATCTGGGT TTTTATTATT TTTCTCAACA CAGGATCTCA CAGTGTGGGT CGAACACACT GTGTGAAGCT GGTGCATCGT  CTCTACCCAG AAGTTGATCC AGAGCTAAAC CCTAACCATG TTGAGCACAT GCTCTACAAG TGCCCTGACG CAATCCCAGA CCCTAAGGCC GTGCAATACG TCAGAAATGA CCGTGGAACA  CCCATGATAC TAGACAACAA CTACTACAGA AACATATTGG ACAACAAGGG CTTGTTGATT GTGGATCATC AACTAGCCAC AGACAAGAGA ACAAAGCCTT ATGTGAAGAA AATGGCTAAG  AGCCAAGATT ACTTCTTTAA GGAATTTGCT AAGGCTATTA CCATTCTGTC TGAAAATAAC CCACTCACTG GTACCAAAGG TGAGATCAGG AAGCAGTGCA ATGTTGCTAA CAAGCTTCAC 
TAG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGTTACCA AAGCTCTCTT CTTCTTTGCT TTATTATCTT TTTCAGCTGT TTCTCTCAGG ACAGCTTTTG CAGAAGATGA GAAAGATCCA GGTCTTGTTG TGAACTTCTA CAAGGACACG  TGCCCTCAAG CTGAAGACAT TATCAGAGAA CAAGTTAAGC TTCTGTACAA GAGACACAAG AACACTGCAT TTTCATGGCT AAGAAACATC TTCCATGACT GCGGTGTTCA GTCATGCGAT  GCTTCCTTGC TGCTGGATTC AACCAGGAGG ACCTTGTCTG AAAAGGAAAC AGACAGGAGC TTTGGCCTGA GGAACTTCAG GTACCTTGAA ACGATCAAAG AAGCTCTAGA AAGGGAGTGT  CCTGGAGTTG TTTCCTGTGC AGACATCCTT GTACTATCTG CTAGAGATGG CATTGTTGCG CTAGGAGGAC CTCACATTCC TCTAAAAAnn ACTGGAAGAA GAGATGGAAG AAAAAGCAGA  GCAGAAGTGG TCGAGCAATA TCTGCCAGAT CATAACGAGA GCATCTCTGT TGTTCTTGAG AGATTTGCTG CAATGGGTAT CGACACCCCT GGAGTTGTCG CCTTGCTAGG ATCTCACAGT  GTGGGTCGAA CACACTGTGT GAAGCTGGTG CATCGTCTCT ACCCAGAAGT TGATCCAGAG CTAAACCCTA ACCATGTTGA GCACATGCTC TACAAGTGCC CTGACGCAAT CCCAGACCCT  AAGGCCGTGC AATACGTCAG AAATGACCGT GGAACACCCA TGATACTAGA CAACAACTAC TACAGAAACA TATTGGACAA CAAGGGCTTG TTGATTGTGG ATCATCAACT AGCCACAGAC  AAGAGAACAA AGCCTTATGT GAAGAAAATG GCTAAGAGCC AAGATTACTT CTTTAAGGAA TTTGCTAAGG CTATTACCAT TCTGTCTGAA AATAACCCAC TCACTGGTAC CAAAGGTGAG 
ATCAGGAAGC AGTGCAATGT TGCTAACAAG CTTCACTAG 

Retrieve as FASTA