Entry information : PabPrx02(PAB00012322 / px2)
Entry ID 1675
Creation 2006-11-07 (Christophe Dunand)
Last sequence changes 2015-12-17 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2021-05-11 (Christophe Dunand)
Peroxidase information: PabPrx02(PAB00012322 / px2)
Name PabPrx02(PAB00012322 / px2)
Class Class III peroxidase    [Orthogroup: Prx004]
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Picea
Organism Picea abies (Norway spruce)    [TaxId: 3329 ]
Cellular localisation N/D
Tissue type Xylem
Inducer Lignification
Repressor N/D
Best BLASTp hits
Perox score E-value PabPrx02
start..stop
S start..stop
PabPrx303 709 0 1..353 1..353
PtaPrx42 640 0 1..353 3..353
PtaPrx135 639 0 1..353 1..351
PtaPrx134 556 0 1..353 1..353
Literature and cross-references PabPrx02(PAB00012322 / px2)
Literature Marjamaa,K. et al., Cloning, characterization and localization of three novel class III peroxidases in lignifying xylem of Norway spruce (Picea abies). Plant Mol. Biol. 61 (4-5), 719-732 (2006)
Protein ref. UniProtKB:   Q5W5I4
mRNA ref. GenBank:   AJ566201.1
Protein sequence: PabPrx02(PAB00012322 / px2)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   353 (334)
PWM (Da):   %s   38391.59 (36221.5)  
PI (pH):   %s   8.19 (8.38) Peptide Signal:   %s   cut: 20 range:20-353
Sequence
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Send to Peroxiscan
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MEKLMILCLF CTLWIACASR ENVLTLNSDP PLVNGLSWTF YKSSCPKLES IVKQRIDFYL KQDITQAAGL LRLHFHDCFV QGCDGSVLLA GSTSGPSEQG APPNLSLRAK AFEIINDIKS  RVDKACKVVV SCADVTALAA KESVRAAGGP QYRIPLGRRD SLKFATQNVT LANLPAPSSK VTTLIKAFAT KNLNVTDLVA LSGGHTIGIG HCTSFTDRLY PKQDTTLNKS FAQRLYTACP 
PKTSSNTTVL DIRTPNVFDN KYYVDLMNRQ GLFTSDQDLY SDSRTKAIVN DFALDQDLFF EKFAVAMVKM GQLNVLTGSK GEIRSNCSVS NLASTSTVEV AAEDVIESYA SFM 

Retrieve as FASTA  
Remarks complete from genomic (MA_10175544, incorrect prediction, last exon is missing due to scaffold border) and mRNA sequence.
DNA
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GCCAAAGCCT TTGAAATAAT CAACGACATC AAGAGCCGGG TGGACAAGGC TTGCAAAGTT GTTGTCTCCT GTGCCGACGT GACCGCTCTT GCAGCTAAAG AGTCTGTCAG GGCGGTAAGC  CACGGAGTTC TCTTCTATTT CATTTTGTTG TATGCCATTT TGGGTTAATT CAATCAGTTT TTTTAAGATT TGCACTGTGA ATAGGCTGGA GGGCCAGAGT ATCGTGTACC GCTGGGGCGC  AGGGACAGCC TGAAATTCGC CACACAAAAC GTGACCCTTG CCAATCTCCC GGCTCCCTCT TCTAAGGTGA CCACGCTCAT CAAAGCTTTT GCCACCAAGA ATCTCAACGT CACAGACCTC  GTTGCTCTTT CAGGTATTGC AATCATCCTT TTAGTTGCTT CTCAATACTG GTCTAAATGT TGGAATACCA TTTTTGTGAT GATGTTTAAC AGTTGTGTCG AGATGACAGG CGGACACACC  ATCGGCATCG GGCACTGCAC CTCCTTCACC GACCGTCTAT ACCCGAAGCA GGACACTACT TTGAATAAAA GCTTCGCCCA GCGTCTCTAC ACCGCCTGTC CTTCCAAGAC CTCCTCCAAC  ACCACTGTAT TGGACATCCG CACGCCCAAC GTGTTCGACA ACAAGTATTA CGTAGACCTG ATGAACCGCC AGGGCCTCTT CACCTCCGAT CAGGATCTCT ACAGCGATTC CCGCACCAAA  GCAATCGTAA ACGATTTTGC CCTCGACCAG GATCTTTTCT TCGAGAAATT TGCAGTGGCC ATGGTGAAAA TGGGGCAGCT GAACGTACTG ACGGGATCCA AAGGGGAGAT CAGGAGTAAC 
TGTTCTGTGA GCAATCTGGC TTCAACTTCG ACCGTCGCAG CAGAAGACGT CATTGAATCT TATGCGTCAT TCATGTAA 

Retrieve as FASTA  
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGAGAAGC TAATGATTCT TTGTTTGTTC TGCACTCTCT GGATCGCTTG TGCGTCCAGA GAGAATGTCC TGACTCTGAA TTCCGATCCG CCCCTTGTGA ACGGGCTGTC ATGGACCTTT  TACAAGAGCA GCTGTCCTAA ATTGGAATCC ATTGTAAAGC AAAGGATTGA CTTCTACCTC AAGCAGGACA TCACCCAGGC AGCCGGGTTG CTGCGCCTCC ATTTCCATGA CTGCTTCGTC  CAGGGCTGTG ACGGATCGGT TCTGTTGGCT GGATCAACAA GTGGCCCGAG CGAACAAGGG GCTCCGCCCA ACTTATCGCT GAGAGCGAAA GCCTTTGAAA TAATCAACGA CATCAAGAGC  CGGGTGGACA AGGCTTGCAA AGTTGTTGTC TCCTGTGCCG ACGTGACCGC TCTTGCAGCT AAAGAGTCTG TCAGGGCGGC TGGAGGGCCA CAGTATCGTA TACCGCTGGG GCGCAGGGAC  AGCCTGAAAT TCGCCACACA AAACGTGACC CTTGCCAATC TCCCGGCTCC CTCTTCTAAG GTGACCACGC TCATCAAAGC TTTTGCCACC AAGAATCTCA ACGTCACAGA CCTCGTTGCT  CTTTCAGGCG GACACACCAT CGGCATCGGG CACTGCACCT CCTTCACCGA CCGTCTATAC CCGAAGCAGG ACACTACTTT GAATAAAAGC TTCGCCCAGC GTCTCTACAC CGCCTGTCCT  CCCAAGACCT CCTCCAACAC CACTGTATTG GACATCCGCA CGCCCAACGT GTTCGACAAC AAGTATTACG TAGACCTGAT GAACCGCCAG GGCCTCTTCA CCTCAGATCA GGATCTCTAC  AGCGATTCCC GCACCAAAGC AATCGTAAAC GATTTTGCCC TCGACCAGGA TCTTTTCTTC GAGAAATTTG CAGTGGCCAT GGTGAAAATG GGGCAGCTGA ACGTACTGAC GGGATCCAAA 
GGGGAGATCA GGAGTAACTG TTCTGTGAGC AATCTGGCTT CAACTTCGAC CGTCGAAGTC GCGGCGGAAG ACGTCATTGA ATCTTATGCG TCATTCATG 

Retrieve as FASTA