Entry information : PabPrx03 (px3)
Entry ID 1677
Creation 2006-11-07 (Christophe Dunand)
Last sequence changes 2015-12-17 (Achraf Jemmat)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2015-12-20 (Christophe Dunand)
Peroxidase information: PabPrx03 (px3)
Name (synonym) PabPrx03 (px3)
Class Class III peroxidase    [Orthogroup: Prx003]
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Picea
Organism Picea abies (Norway spruce)    [TaxId: 3329 ]
Cellular localisation N/D
Tissue type Xylem
Inducer Lignification
Repressor N/D
Best BLASTp hits
Perox score E-value PabPrx03
start..stop
S start..stop
PtaPrx48 623 0 1..351 1..351
PtaPrx23 592 0 3..351 16..366
PtaPrx07 591 0 5..351 1..347
PsyPrx01 587 0 3..351 13..363
Literature and cross-references PabPrx03 (px3)
Literature Marjamaa,K. et al., Cloning, characterization and localization of three novel class III peroxidases in lignifying xylem of Norway spruce (Picea abies). Plant Mol. Biol. 61 (4-5), 719-732 (2006)
Protein ref. UniProtKB:   Q5W5I2
mRNA ref. GenBank:   AJ566203.1
Protein sequence: PabPrx03 (px3)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   351 (329)
PWM (Da):   %s   37946.9 (35531.6)  
PI (pH):   %s   5.93 (5.02) Peptide Signal:   %s   cut: 23 range:23-351
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAKHITPLAS VILCMFVIYG RAVHSLPTPV AGLSWTFYST SCPSLESIVR QRMGAYLSAD ITQAAGLLRL HFHDCFVQGC DGSVLLNSTS GEQTTPPNLS LRAQAFKIIN DIKQHVEAAC  SGIVSCADIL ALAARDSVAM AGGPFYPIPF GRRDSLTFAN LSTTLANLPS PTSNVTVLIS VLGPKGLTFT DLVALSGGHT IGRSNCSSFQ NRLYNSTTGI SMQDSTLDQN FAKNLYLTCP 
TNTSVNTTNL DILTPNVFDN KYYVDLLNEQ TLFTSDQSLY TDTRTRDIVK SFALNQSLFF QQFVLSMLKM GQLDVLTGSE GEIRNNCWAA NPSTYSIIDS EASQESPSYS M 

Retrieve as FASTA  
Remarks Complete sequence from 1 mRNA.
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCCAAGC ATATCACGCC TCTGGCTTCT GTTATCCTCT GCATGTTTGT GATATATGGT CGCGCTGTCC ATTCTCTGCC AACTCCCGTG GCGGGTCTTT CGTGGACGTT CTACAGCACG  AGCTGCCCGT CATTGGAGTC GATAGTGCGG CAGCGCATGG GAGCCTATTT GAGTGCAGAC ATCACACAGG CTGCAGGATT GTTAAGGCTC CACTTCCACG ACTGCTTTGT CCAGGGATGC  GACGGGTCCG TGTTGTTGAA TTCAACGTCG GGTGAGCAAA CAACTCCCCC AAACTTATCA CTGAGAGCGC AGGCTTTCAA GATTATCAAC GACATCAAAC AGCACGTAGA AGCCGCCTGC  AGCGGAATTG TGTCGTGTGC CGACATTCTT GCCTTAGCGG CCCGTGACTC CGTTGCGATG GCTGGAGGGC CGTTCTATCC CATACCATTC GGCCGCAGGG ACAGCCTTAC TTTCGCCAAT  TTATCGACCA CTCTCGCCAA TTTGCCATCC CCAACCTCCA ATGTAACGGT GCTTATCAGT GTTTTGGGTC CCAAAGGCTT GACTTTCACA GATCTGGTGG CTCTCTCAGG AGGACATACA  ATTGGCAGAA GCAACTGTTC CTCCTTCCAA AACAGACTAT ATAACAGCAC CACTGGTATA AGTATGCAGG ATTCCACTTT GGACCAGAAT TTCGCTAAGA ATCTTTACCT CACCTGCCCT  ACCAATACCA GCGTTAACAC CACCAACCTG GATATCCTCA CTCCAAATGT ATTCGACAAC AAATACTACG TCGACCTGCT CAACGAACAG ACTCTTTTCA CGTCCGACCA GAGTCTCTAC  ACCGACACTC GAACCCGGGA CATTGTCAAA AGCTTTGCTC TGAATCAGAG CCTCTTCTTC CAACAGTTTG TGCTCAGCAT GCTTAAAATG GGCCAGCTGG ATGTGCTCAC AGGAAGCGAG 
GGAGAGATCC GTAACAACTG CTGGGCTGCC AATCCTTCAA CATACTCGAT CATCGATTCA GAGGCATCTC AAGAATCGCC TTCCTACTCT ATG 

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