Entry information : ThPrx42
Entry ID 1681
Creation 2006-03-22 (Christophe Dunand)
Last sequence changes 2015-11-12 (Christophe Dunand)
Sequence status complete
Reviewer Achraf Jemmat
Last annotation changes 2015-11-12 (Achraf Jemmat)
Peroxidase information: ThPrx42
Name ThPrx42
Class Class III peroxidase    [Orthogroup: Prx008]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Thellungiella
Organism Thellungiella halophila (Eutrema halophilum)    [TaxId: 98038 ]
Cellular localisation N/D
Tissue type Leaves
Inducers Cold stress
Drought
Salt stress
Repressor N/D
Best BLASTp hits
Perox score E-value ThPrx42
start..stop
S start..stop
TsPrx42 689 0 1..331 1..331
BrPrx42_other 684 0 1..331 1..331
BoPrx42_other 684 0 1..331 1..331
BnPrx42_other 684 0 1..331 1..331
Literature and cross-references ThPrx42
Literature Taji,T., Sakurai,T., Mochida,K., Ishiwata,A., Kurotani,A., Totoki,Y., Toyoda,A., Sakaki,Y., Seki,M., Ono,H., Sakata,Y., Tanaka,S. and Shinozaki,K. BMC Plant Biol. 8, 115 (2008).
mRNA ref. GenBank:   AK353064.1
Protein sequence: ThPrx42
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   332 (308)
PWM (Da):   %s   37448.11 (35018.9)  
PI (pH):   %s   7.78 (7.82) Peptide Signal:   %s   cut: 24 range:24-331
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGGKGAMMVA ILCLWALSAT SEAVVTEEEP GLMMNFYKDT CPQAEDIIRE QVKLLYKRHK NTAFSWLRNI FHDCAVESCD ASLLLDSTRR ELGEKEHDRS FGLRNFRYIE EIKEALEREC  PGVVSCSDIL VLSAREGIEA VGGPHIPMKT GRRDGRKSRT DMLESYLPDH NESISVVLEK FKSIGIDTPG LVALLGSHSV GRTHCVKLVH RLYPEVDPSL NPDHVPHMLH KCPDSIPDPK 
AVQYVRNDRG TPMVLDNNYY RNILDNKGLL LVDHQLAHDK RTRPIVKKMA KDQAYFFKEF TRAIQILSEN NPLTGSKGEI RKQCNLANKI H* 

Retrieve as FASTA  
Remarks
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGAGGAA AAGGTGCGAT GATGGTGGCG ATACTCTGCC TTTGGGCACT CTCTGCAACA TCAGAAGCAG TTGTAACAGA GGAGGAGCCC GGCTTGATGA TGAACTTCTA CAAGGACACG  TGTCCTCAGG CCGAAGACAT CATCCGTGAA CAAGTCAAAC TCCTCTACAA ACGCCACAAG AACACCGCTT TTTCTTGGCT CCGTAACATC TTCCACGACT GCGCCGTGGA GTCATGCGAT  GCGTCGCTTT TGCTTGATTC CACAAGAAGA GAGCTAGGAG AGAAAGAACA CGACAGGAGC TTCGGTCTGA GAAACTTCAG GTACATAGAG GAGATCAAGG AAGCTCTTGA GAGGGAGTGC  CCTGGTGTTG TCTCTTGTTC CGACATTCTC GTCTTGTCCG CAAGAGAAGG CATTGAAGCA GTGGGAGGAC CGCATATTCC GATGAAGACA GGAAGGAGAG ATGGACGTAA AAGCAGGACT  GATATGCTTG AGTCTTATCT TCCCGACCAC AACGAGAGTA TCTCTGTAGT TCTTGAAAAG TTCAAATCCA TCGGAATCGA CACTCCCGGC CTCGTCGCTC TCCTCGGATC TCACAGCGTG  GGAAGAACTC ATTGTGTTAA GCTGGTGCAC CGTTTGTACC CTGAGGTTGA TCCGTCTTTG AACCCGGACC ACGTTCCTCA CATGCTTCAC AAGTGTCCTG ACTCGATCCC TGACCCAAAA  GCGGTCCAGT ACGTGCGTAA CGACCGTGGT ACGCCCATGG TGCTAGACAA CAACTACTAC CGTAACATCC TGGACAACAA GGGTTTGCTC CTTGTGGACC ACCAGCTCGC ACACGACAAA  CGGACCAGAC CAATTGTTAA GAAGATGGCT AAGGACCAGG CTTACTTCTT CAAGGAGTTC ACTAGAGCGA TCCAGATCTT GTCTGAGAAC AATCCTTTGA CTGGTTCCAA GGGTGAGATC 
AGGAAACAGT GTAATCTGGC CAACAAGATC CACTGA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GGAGAGTGGT GTTGTGTGAG AGAGAGAAGA AGAAGGAGAA AGATAAAAAA AAATGGGAGG AAAAGGTGCG ATGATGGTGG CGATACTCTG CCTTTGGGCA CTCTCTGCAA CATCAGAAGC  AGTTGTAACA GAGGAGGAGC CCGGCTTGAT GATGAACTTC TACAAGGACA CGTGTCCTCA GGCCGAAGAC ATCATCCGTG AACAAGTCAA ACTCCTCTAC AAACGCCACA AGAACACCGC  TTTTTCTTGG CTCCGTAACA TCTTCCACGA CTGCGCCGTG GAGTCATGCG ATGCGTCGCT TTTGCTTGAT TCCACAAGAA GAGAGCTAGG AGAGAAAGAA CACGACAGGA GCTTCGGTCT  GAGAAACTTC AGGTACATAG AGGAGATCAA GGAAGCTCTT GAGAGGGAGT GCCCTGGTGT TGTCTCTTGT TCCGACATTC TCGTCTTGTC CGCAAGAGAA GGCATTGAAG CAGTGGGAGG  ACCGCATATT CCGATGAAGA CAGGAAGGAG AGATGGACGT AAAAGCAGGA CTGATATGCT TGAGTCTTAT CTTCCCGACC ACAACGAGAG TATCTCTGTA GTTCTTGAAA AGTTCAAATC  CATCGGAATC GACACTCCCG GCCTCGTCGC TCTCCTCGGA TCTCACAGCG TGGGAAGAAC TCATTGTGTT AAGCTGGTGC ACCGTTTGTA CCCTGAGGTT GATCCGTCTT TGAACCCGGA  CCACGTTCCT CACATGCTTC ACAAGTGTCC TGACTCGATC CCTGACCCAA AAGCGGTCCA GTACGTGCGT AACGACCGTG GTACGCCCAT GGTGCTAGAC AACAACTACT ACCGTAACAT  CCTGGACAAC AAGGGTTTGC TCCTTGTGGA CCACCAGCTC GCACACGACA AACGGACCAG ACCAATTGTT AAGAAGATGG CTAAGGACCA GGCTTACTTC TTCAAGGAGT TCACTAGAGC  GATCCAGATC TTGTCTGAGA ACAATCCTTT GACTGGTTCC AAGGGTGAGA TCAGGAAACA GTGTAATCTG GCCAACAAGA TCCACTGAGG TTGGAAAGAG TGAGAAAAGA GAGAGCGCCT  CTTTGTGTTT GGGGTTTTCT CTGCACTTAC TTGGCATTGA GCTAAGATGA ATAAATAAAT GTTTTAAGAA GTTGAAATGA AATGAAGGGT GATGATGAAT GCATCATGGT GGTGACCACA  TGCACTCTTC TTTTTGTGTG TTGTTGTTTT AGCCTTAATG CTTTAATTAT GATGGTAGTG GGTCTTTCGA GTTATTTAAT CAAAATGTTG TTTCTTTTGT TGATTTTGGG TTGTAGTGGG 
GTTGATGGCA TGGATGTATG ATATGATGGA CTGGTGTATG GGTATCAAGT AGTATGATGA TCTAATGATA AGTGAATGGT GGAAAAAAAA AAAAAAA 

Retrieve as FASTA