Entry information : PbPrx03
Entry ID 1690
Creation 2007-09-18 (Christophe Dunand)
Last sequence changes 2007-09-18 (Christophe Dunand)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2011-01-28 (Qiang Li)
Peroxidase information: PbPrx03
Name PbPrx03
Class Class III peroxidase    [Orthogroup: Prx002]
Taxonomy Eukaryota Viridiplantae Streptophyta Salicaceae Populus
Organism Populus balsamifera (trichocarpa x deltoides)    [TaxId: 3695 ]
Cellular localisation N/D
Tissue type Roots
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PbPrx03
start..stop
S start..stop
PtPrx02 687 0 1..331 1..331
PbPrx01 687 0 1..331 1..331
PtralPrx01 677 0 1..331 1..331
PtrePrx01 676 0 1..331 1..331
Literature and cross-references PbPrx03
Literature Ralph,S., et al., Genomics of hybrid poplar (Populus trichocarpax deltoides) interacting with forest tent caterpillars (Malacosoma disstria): normalized and full-length cDNA libraries, expressed sequence tags, and a cDNA microarray for the study of insect-induced defences. Mol. Ecol. 15 (5), 1275-1297 (2006).
EST ref. GenBank:   CV275616 [3' end]   CN519752 [Fragment]
Protein sequence: PbPrx03
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   331 (307)
PWM (Da):   %s   37304.06 (34750.7)  
PI (pH):   %s   7.79 (7.52) Peptide Signal:   %s   cut: 25 range:25-331
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MDAKALFFFA LLSFSAVSVR PALAENEEDP GLVMNFYKDT CPQAEDIVKE QVRLLYKRHK NTAFSWLRNI FHDCAVQSCD ASLLLDSTRR TLSEKETDRS FGLRNFRYFD DIKEAVEREC  PGVVSCADIL VLSARDGIVS LGGPHIPLKT GRRDGRKSRA DVIEDYLPDH NESISVVLDR FASMGIDTPG LVALLGAHSV GRTHCVKLVH RLYPEVDPAL NPDHVEHMLY KCPDSIPDPK 
AVQYVRNDRG TPMVLDNNYY RNILDNKGLL IVDHQLATDK RTKPYVKKMA KSQDYFFKEF SRAITILSEN NPLTGTKGEI RKQCTVANKH H 

Retrieve as FASTA  
Remarks Complete sequence from 29 ESTs. Cultivar="H11-11" and "Beaupre".