Entry information : GhyPrx05
Entry ID 1758
Creation 2005-07-18 (Christophe Dunand)
Last sequence changes 2005-07-18
Sequence status partial
Reviewer reviewer name not stored
Last annotation changes 2007-09-17 (Christophe Dunand)
Peroxidase information: GhyPrx05
Name GhyPrx05
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Viridiplantae (green plants); Streptophyta; Angiospermae; Eudicotyledons
Organism Gerbera hybrida cv. Terra Regina    [TaxId: 226891 ]
Cellular localisation N/D
Tissue type Flower scapes
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GhyPrx05
start..stop
S start..stop
LvPrx06 118 1e-34 15..78 4..67
LsaPrx06 116 1e-33 15..78 4..67
LsPrx06 108 4e-31 26..78 14..66
VvPrx06 100 1e-27 15..78 3..65
Literature and cross-references GhyPrx05
Literature Laitinen,R.A., Immanen,J., Auvinen,P., Rudd,S., Alatalo,E.R., Paulin,L., Ainasoja,M., Kotilainen,M., Koskela,S., Teeri,T.H. and Elomaa,P. Analysis of the floral transcriptome uncovers new regulators of organ determination and gene families related to flower organ differentiation in Gerbera hybrida (Asteraceae). Genome Res. 15 (4), 475-486 (2005).
EST ref. GenBank:   AJ762218 [Fragment]
Protein sequence: GhyPrx05
Sequence Properties
first value : protein
second value (mature protein)
Length (aa): %sProtein length in amino acid 78 (49)
PWM (Da): %sMolecular Weight of protein
Protein Mw is calculated by the addition of average isotopic masses
of amino acids in the protein and the average isotopic mass of one water molecule.
Molecular weight values are given in Dalton (Da).
8483.52 (5418.8)  
PI (pH): %sIso electric point of protein
Calculation done with EMBOSS parameters.
Please see Dataset for pKi calculation for more information
10.37 (10.05) Peptide Signal: %sProtein signal for mature protein.
if exist :cut position of signal peptide.
range: start-end pos of mature protein
cut: 30 range:30-78
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

AIITITPNKM RLPPLSVVFC LFQVAVAAAS PPLRPGFYAK SCPNAELIVK DVMKKAMIRE PRSGASVMRL QFHDCFVN 

Retrieve as FASTA  
Remarks Sequence from singleton (probably DNA contamination). 5'and 3'are missing.