Entry information : LpPrx06
Entry ID 1825
Creation 2007-02-14 (Christophe Dunand)
Last sequence changes 2007-02-14
Sequence status partial
Reviewer reviewer name not stored
Last annotation changes 2007-09-07 (Christophe Dunand)
Peroxidase information: LpPrx06
Name LpPrx06
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Solanum
Organism Lycopersicon pennellii    [TaxId: 28526 ]
Cellular localisation N/D
Tissue type Pollens
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LpPrx06
start..stop
S start..stop
LpPrx05 203 1e-65 1..95 152..246
LePrx96 201 6e-65 1..95 152..246
NtPrx26-1A 151 2e-47 1..95 164..259
NtPrx26-1B 127 1e-38 1..85 162..247
Literature and cross-references LpPrx06
Literature van der Hoeven,R., Bezzerides,J., Sun,H., Cho,J., Utterback,T., Hansen,C., Ronning,C. and Tanksley,S. Generation of ESTs from wild tomato (L. pennellii) pollen.
EST ref. GenBank:   BG139345 [5' end]
Protein sequence: LpPrx06
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   95
PWM (Da):   %s   10083.75  
PI (pH):   %s   4.98
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

MGYGGAPITQ NPSDQQTVPE QAGAAQNHPT PEEIKEQRKH AGLQVGFYDN TCPNAEKIIK DGMNRAFGND SSMAAPIGRL LFHDCFVNGC DASIL 

Retrieve as FASTA  
Remarks Partial sequence from 7 ESTs. 3'is missing. TGI from Lycopersicum esculentum but sequences from pennillii!!!