Entry information : ZmPrx11 (GRMZM2G130904 / peroxidase R11)
Entry ID 184
Creation 2006-07-13 (Christophe Dunand)
Last sequence changes 2006-07-13
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2011-01-25 (Christophe Dunand)
Peroxidase information: ZmPrx11 (GRMZM2G130904 / peroxidase R11)
Name (synonym) ZmPrx11 (GRMZM2G130904 / peroxidase R11)
Class Class III peroxidase    [Orthogroup: Prx021]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Zea
Organism Zea mays    [TaxId: 4577 ]
Cellular localisation N/D
Tissue type Mixed tissues
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value ZmPrx11
start..stop
S start..stop
SbPrx06 553 0 1..328 1..326
ZmPrx86 525 0 7..328 4..331
SiPrx159 522 0 1..328 1..326
OsPrx126 485 1e-174 6..328 3..326
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 236902908..236903132 225 N° 2 236903226..236903408 183 N° 3 236903541..236903706 166 N° 4 236903846..236904258 413
join(236902908..236903132,236903226..236903408,236903541..236903706,236903846..2 36904258)


exon

Literature and cross-references ZmPrx11 (GRMZM2G130904 / peroxidase R11)
Literature Padegimas,L.S. and Reichert,N.A. Isolation of genes and regulatory sequences implicated in hypersensitive response from Zea mays nematode-resistant line MP307. Unpublished
Protein ref. UniProtKB:   Q9ZTS4 [Fragment]   B4FQI9 [Mismatch]
DNA ref. GenBank:   AC210097.1 (26353..27700)
mRNA ref. GenBank:   BT039377   AF037162 [Fragment]
Cluster/Prediction ref. UniGene:   Zm.101250
Protein sequence: ZmPrx11 (GRMZM2G130904 / peroxidase R11)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   328
PWM (Da):   %s   35298.29  
PI (pH):   %s   5
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MEHSLYYYCRSWLLVCSSVLALCLGSRGQLTPGFYRSTCPQLYYTVQRHVFDAMRAEMRMGASLLRLHFHDCFVNGCDASILLDGDDGEKFALPNRNSVRGFEVIDAIKADLESVCPEVVSCADIVALAASYGVLFSGGPYYDVLLGRRDGLVANQSGANSGLPSPFEPIDSIIHKFAAVDLNTTDVVVLSGAHTIGRARCALFSNRLSNFSATESVDPTLDAGLAESLQSLCAGGDGNQTSALDVSTPNAFDNAYYKNLLLEKGLLSSDQGLFSSPEGVARTKALVETYSQDSEHFFCHFASSMIKMGNIPLTASDGEIRKNCRVAN

Retrieve as FASTA  
Remarks Completed sequence from genomic (chromo 1, 3 introns) and 11 ESTs. Also found in AC203832.3.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAGCACTCTTTATATTATTACTGCCGCAGCTGGTTGCTTGTATGCTCCTCGGTTCTCGCGCTGTGCCTCGGTAGCCGGGGCCAGCTGACACCGGGTTTCTACCGCAGCACTTGCCCT
CAGCTGTACTACACCGTGCAGCGCCACGTGTTCGACGCCATGCGAGCTGAGATGAGGATGGGCGCCTCCCTCCTCAGGCTGCACTTCCACGACTGCTTCGTCAAT
GTAATCGTAATATAT
ATATAGCAGCAACGTTCTTTTCATCTTTACTCATGGTGACGACGACGAATATAGTTACTGAAACGCTACGGCACGCAGGGGTGTGACGCTTCCATCCTCTTGGACGGCGACGACGGCGAG
AAGTTCGCACTGCCCAACCGGAACTCGGTCAGAGGGTTCGAGGTCATCGACGCCATAAAGGCGGATCTCGAGAGCGTCTGCCCGGAGGTGGTGTCGTGCGCTGACATCGTAGCCCTTGCC
GCCAGCTATGGAGTCCTCTTT
GTAAGCGCGCTACGTACTCGATCAGTCGATCGTAGTCGTACTAGTATATATCTCCTTCCTTCTGTCTGTCTGTCTGTCAGTTCATTCTGTCCGAACATT
ATTCATCAGTTCTATTTTTATTTTCCCCCACAGAGTGGAGGGCCTTACTACGATGTGCTTCTGGGGAGAAGGGACGGGCTGGTGGCCAACCAGTCAGGAGCCAACAGTGGTCTGCCTTCG
CCGTTCGAGCCCATCGACTCCATCATTCACAAGTTCGCCGCCGTCGACCTCAACACGACCGACGTCGTGGTCTTGTCAG
GTAGTATAATATAAAACAGCCTCCATCGTCGCTAGCTCTGT
GATCTGATTCTGCAGGAGCAGGGCCTCCTCCTCCTCCTCATGCATGTATATGCATGCATGTGATCTCATTAACTTGGAAAAATAAAAATAATGGACAGGAGCCCACACGATCGGGCGAGC
CCGGTGCGCGCTGTTCAGCAACCGCCTGTCCAACTTCTCGGCCACGGAGTCGGTGGACCCGACGCTGGACGCCGGCCTCGCCGAGAGCCTGCAGAGCCTCTGCGCGGGCGGCGACGGCAA
CCAGACCTCGGCGCTGGACGTCAGCACCCCCAACGCGTTCGACAACGCCTACTACAAGAACCTCCTGCTGGAGAAGGGCCTCCTGTCCTCCGACCAGGGCCTCTTCTCCAGCCCGGAAGG
CGTCGCCAGGACGAAAGCTCTGGTGGAGACCTACAGCCAGGACAGCGAGCACTTCTTCTGCCATTTCGCCTCGTCCATGATCAAGATGGGCAACATCCCGCTCACGGCCTCCGACGGCGA
GATCCGCAAGAACTGCAGAGTAGCGAACTAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAGCACTCTTTATATTATTACTGCCGCAGCTGGTTGCTTGTATGCTCCTCGGTTCTCGCGCTGTGCCTCGGTAGCCGGGGCCAGCTGACACCGGGTTTCTACCGCAGCACTTGCCCT
CAGCTGTACTACACCGTGCAGCGCCACGTGTTCGACGCCATGCGAGCTGAGATGAGGATGGGCGCCTCCCTCCTCAGGCTGCACTTCCACGACTGCTTCGTCAAT
GGGTGTGACGCTTCC
ATCCTCTTGGACGGCGACGACGGCGAGAAGTTCGCACTGCCCAACCGGAACTCGGTCAGAGGGTTCGAGGTCATCGACGCCATAAAGGCGGATCTCGAGAGCGTCTGCCCGGAGGTGGTG
TCGTGCGCTGACATCGTAGCCCTTGCCGCCAGCTATGGAGTCCTCTTT
AGTGGAGGGCCTTACTACGATGTGCTTCTGGGGAGAAGGGACGGGCTGGTGGCCAACCAGTCAGGAGCCAAC
AGTGGTCTGCCTTCGCCGTTCGAGCCCATCGACTCCATCATTCACAAGTTCGCCGCCGTCGACCTCAACACGACCGACGTCGTGGTCTTGTCAG
GAGCCCACACGATCGGGCGAGCCCGG
TGCGCGCTGTTCAGCAACCGCCTGTCCAACTTCTCGGCCACGGAGTCGGTGGACCCGACGCTGGACGCCGGCCTCGCCGAGAGCCTGCAGAGCCTCTGCGCGGGCGGCGACGGCAACCAG
ACCTCGGCGCTGGACGTCAGCACCCCCAACGCGTTCGACAACGCCTACTACAAGAACCTCCTGCTGGAGAAGGGCCTCCTGTCCTCCGACCAGGGCCTCTTCTCCAGCCCGGAAGGCGTC
GCCAGGACGAAAGCTCTGGTGGAGACCTACAGCCAGGACAGCGAGCACTTCTTCTGCCATTTCGCCTCGTCCATGATCAAGATGGGCAACATCCCGCTCACGGCCTCCGACGGCGAGATC
CGCAAGAACTGCAGAGTAGCGAACTAA

Retrieve as FASTA