Entry information : NtPrx04-1A (NtPrx04a)
Entry ID 1864
Creation 2010-02-11 (Christophe Dunand)
Last sequence changes 2010-02-11 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2010-02-22 (Christophe Dunand)
Peroxidase information: NtPrx04-1A (NtPrx04a)
Name (synonym) NtPrx04-1A (NtPrx04a)
Class Class III peroxidase    [Orthogroup: Prx002]
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Nicotiana
Organism Nicotiana tabacum    [TaxId: 4097 ]
Cellular localisation N/D
Tissue type Cell culture
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value NtPrx04-1A
start..stop
S start..stop
LePrx54 581 0 1..323 1..321
MePrx53 507 0 5..322 10..325
PpePrx07 504 0 10..323 13..325
RcPrx16 497 8e-179 9..322 15..326
Literature and cross-references NtPrx04-1A (NtPrx04a)
Literature Matsuoka,K., Demura,T., Galis,I., Horiguchi,T., Sasaki,M., Tashiro ,G. and Fukuda,H. A Comprehensive Gene Expression Analysis Toward the Understanding of Growth and Differentiation of Tobacco BY-2 Cells Plant Cell Physiol. 45 (9), 1280-1289 (2004)
EST ref. GenBank:   FG164921.1 [5' end]   EH622672.1 [3' end]
Cluster/Prediction ref. UniGene:   Nta.2094
Protein sequence: NtPrx04-1A (NtPrx04a)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   352 (328)
PWM (Da):   %s   37064.33 (34526.0)  
PI (pH):   %s   4.71 (4.83) Peptide Signal:   %s   cut: 25 range:25-352
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAPPSSLAVL CILLAIFSFY ESNAQLSANF YSTTCSNVSS IVQNVIQQAL QSDSRIGASL IRLHFHDCFV NGCDASLLLD NNATANIVSE KDAAPNANSV RGFDVVDNIK SAVESSCPGV  VSCADILALA AEASVSLAGG PSWNVSLGRR DSRTANQGGA NTSIPSPVEG LSNITAKFSA VGLNVTDLVA LSGAHTFGRA QCRVFSARLN NFNGTGNPDP TLNTTYLANL RQICPQNGSA 
TALANLDPTT SDSFDNNYFA NLQSNQGLLQ SDQELFSTPG AATVSIVNTF SSNQNTFFQS FVQSMINMGN ISPLTGTNGE IRLKESIEAK VLTKWFFFSE AKVGTPNQQV LL 

Retrieve as FASTA  
Remarks Complete sequence from 6 ESTs. Cultivar="Hicks Broadleaf".
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TCGGTCCGGA TTCCCGGGAT CCTAATATCA CAAGACAGAG CAAATTATTT TGTTTGACTA TGATGTTTGA AATTGTCAAG AATAAATCAG GGAAGCAAGG CACTTATTGT GTATATATTG  TCTAGATCTC TAGCTATTCA CGAGACACAA GTAATAGAAA TTGTCTAGCT ATAGCTAGCT TTACTTCTTT ATTACCAAAC AAAAATGGCT CCTCCTTCTT CTTTAGCAGT ATTATGCATT  TTACTAGCAA TTTTCAGTTT CTATGAATCA AATGCTCAGT TGAGTGCTAA TTTTTACTCA ACTACATGTT CAAATGTTTC AAGCATTGTG CAAAATGTAA TTCAGCAAGC TTTGCAGTCT  GATTCTCGTA TTGGGGCCAG CCTCATTCGT CTCCATTTCC ATGATTGCTT TGTCAACGGA TGTGATGCTT CGCTTTTGTT GGATAATAAT GCAACAGCAA ATATAGTAAG TGAGAAAGAT  GCAGCGCCAA ATGCTAATTC CGTAAGAGGT TTCGATGTTG TTGACAACAT CAAATCTGCT GTTGAGAGTT CTTGCCCTGG TGTTGTATCC TGTGCTGACA TTCTTGCTCT TGCTGCAGAA  GCCTCAGTTT CTTTGGCAGG TGGTCCTTCG TGGAATGTTT CATTAGGGAG AAGAGACAGC AGAACAGCAA ACCAGGGAGG AGCCAATACT TCTATTCCTT CTCCTGTTGA AGGCTTAAGC  AACATTACAG CTAAGTTTTC TGCTGTTGGC CTTAACGTTA CCGATCTAGT TGCCTTATCC GGTGCACACA CGTTTGGACG TGCACAATGT CGCGTATTCA GTGCCCGCCT TAACAATTTC  AATGGCACAG GAAATCCTGA CCCTACCTTA AACACAACTT ATTTGGCCAA CCTAAGGCAA ATATGTCCTC AAAATGGAAG TGCCACAGCC TTGGCTAACC TTGATCCTAC AACCTCCGAT  AGTTTTGACA ATAATTATTT TGCAAACTTG CAGAGTAATC AAGGGCTTCT GCAATCAGAT CAAGAGTTAT TCTCCACACC TGGTGCAGCA ACTGTCTCAA TTGTCAACAC ATTTAGCAGT  AACCAAAATA CCTTCTTTCA AAGCTTCGTT CAGTCAATGA TTAATATGGG AAACATTAGC CCATTAACTG GGACCAATGG AGAGATTCGG TTAAAAGAGT CAATTGAAGC AAAAGTTTTG 
ACTAAATGGT TTTTTTTTTC TGAAGCAAAG GTTGGTACGC CAAATCAGCA AGTTTTGTTA TGAACGAATT TCTTAATTTG CTTTACTTAA GCCAAGTGTT ATTACTTCGT GAAACTT 

Retrieve as FASTA