Entry information : HaPrx17 (HanXRQChr01g0013211)
Entry ID 1873
Creation 2005-09-27 (Christophe Dunand)
Last sequence changes 2016-04-27 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaPrx17 (HanXRQChr01g0013211)
Name (synonym) HaPrx17 (HanXRQChr01g0013211)
Class Class III peroxidase    [Orthogroup: Prx007]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaPrx17
start..stop
S start..stop
HarPrx06 648 0 1..322 1..322
LvPrx34 547 0 3..322 4..321
LperPrx34 502 0 1..294 1..296
HaPrx38 502 0 1..322 23..344
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 81191006..81191221 216 N° 2 81191326..81191517 192 N° 3 81192794..81193354 561  
join(81191006..81191221,81191326..81191517,81192794..81193354)


exon

Literature and cross-references HaPrx17 (HanXRQChr01g0013211)
Literature Kozik,A., Michelmore,R.W., Knapp,S., Matvienko,M., Rieseberg,L.,
Lin,H., van Damme,M., Lavelle,D., Chevalier,P., Ziegle,J., Ellison,P., Kolkman,J., Slabaugh,M.S., Livingston,K., Zhou,Y., Lai,Z., Church,S., Jackson,L. and Bradford,K. Lettuce and Sunflower ESTs from the Compositae Genome Project
DNA ref. HanXRQ genome:   HanXRQChr01 (81191006..81193354)
EST ref. GenBank:   BQ969478.1 [5' end]
Cluster/Prediction ref. HanXRQ:   HanXRQChr01g0013211
Protein sequence: HaPrx17 (HanXRQChr01g0013211)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   322 (297)
PWM (Da):   %s   34464.42 (31934.1)  
PI (pH):   %s   9.66 (9.66) Peptide Signal:   %s   cut: 26 range:26-322
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MASSILISFALLASTLFFMSGPSSAQLTPNFYSKSCPKVFDVVGSVVRAAVAKEKRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTARPNVNSVRGFNVIDDVKKKVEGVCPGVVSCADILAISALESMLALGGPEWTVKLGRRDSKTASFSAANSGVIPPPTSTLSNLINRFQAVGLSTRDMVALSGAHTIGQARCTTFRARIYNDTNIDAAFARSRRSNCPRPSGSGDNNLAPLDVKTPNSFDNAYYGNLISQKGLLRSDQQLHNGGSTDSLVEQYNKNPRSFYADFAAAMVRMGDIRPLTGRNGEIRKNCRVPN*

Retrieve as FASTA  
Remarks Complete sequence from genomic and 1 EST.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTCTTCTATTCTCATCTCCTTTGCATTGCTTGCTTCTACCTTGTTCTTCATGAGTGGTCCCTCTTCAGCCCAACTCACTCCCAACTTCTACTCAAAAAGTTGCCCGAAGGTTTTT
GATGTTGTCGGCTCAGTGGTTAGGGCCGCTGTAGCCAAGGAGAAACGCATGGGTGCATCTCTCCTTAGGCTCCATTTCCACGATTGTTTTGTAAAT
GTATGTATCTTAATTTCTCTCTCT
ATTTGACTTGATTATCGTGTTAAGAGTTACTTGTTTGGTGATAATATATAGTTAACGTTTAAAAATTCTTGTTTTTGTAGGGGTGTGACGGGTCCATTCTACTAGATGACACATCTTCGT
TCACTGGAGAAAAGACTGCCAGGCCGAATGTGAATTCGGTTAGGGGTTTTAATGTGATTGATGATGTAAAGAAGAAGGTTGAAGGAGTTTGTCCCGGTGTTGTCTCTTGTGCTGATATAC
TGGCGATTTCTGCTCTTGAATCCATGCTTGCT
GTAAGTATAACTTGATGCGTCGCTATATAGTTATGTAGTGTTGAGCTATATATCACCCTTTCTGTCACAACTCACAAAGTATATAATA
TGTTAACATGGTCTTGTAAGCTCGTTTTCATAACATGATATGTTAACATAAATGCAAGGTTACTAGCCTAGCTAGGGAGAATAGCCAATCGACCAAACTAAATTAATAAGAGTCTCTAAA
ACTGATTAAGTAACCAATGATGAAACCTTAATTGGTCAAAGGGTTATCATAATTTATCCTATTTACCGACTAGTCAAACTTATGTATATTAAATTTTAAAAAATGAAAGAAAAAGAAACG
ACTAAAATCAATGTCTTTCAAGTTTTAAATATAAACAATAATAAACTAACTTTTCATCCACTAAAATATATTTAATTATTTATCATAAGAGCATATGAGTTGTGGGGGGCTAAGCATGAG
TTGGGGGGGCTAAGCCATAACAAAAGAGCTGTGAAGGCGATGAATGTGGAAGTTCTTGCGGGCGTGGAGCACTTTTTTTTTTTTAATTAGTTAGTTAAACAAAAATAAGCAGTCGTATAG
AACCATCTCATTCCACCATCACATGTTAGGGATTTTTTTTTTTCATATTTCATATTCACAAAAACATAGCCTATTATAATTTAATTTAGTATAGAGAAAGTTACCAAAATAGATAACTTC
GACAAAAAATTTTATTCCAAAATAGACAAAACTCCTTAGCCTATTTAATATAGAGAAAGTTACCAAAATAGATAACTTTGACAAAAAAAAATTTATTCCAAAATCGACAAAACTCCTTAG
CCTTTTCAAAACGAATTAAACCAATCAAAATACGATACGTCAACTCCATCAACAGAGACTACTAGTATTTAGCTGCCGCTGGCTAAGGGATTTTCTAGTGTTTAGTCGGCGCCTAGCTAG
GGCTTATTTTATTGTTTAGCCGGCGGCTAGAAGCTTAGCCCGTACTTTCTTTTTGTTTAGTTGGTGGCTAACTTGATTACTTTAGAATCGGCTAAATATGTTGTCTAATGTTGTCTATTT
TGAATTTTTTTTTTTTTTGGTAAAAATATGTAATTTTGCCTTTAATTAATATATAACATAGTGATTTAGTTCTGTTGAAATGATTGGTGTCGGCATCAATACCAGTAACCACATCCAATA
ACTGTTCCAAAAAACAATGTTTTGATTTAACAGATTTGTCCGTAACAAAAAAAAAATAAAAATAAAAAAATAACACTAGTAAACTGATGTTACACAATTTGTCTAAAGTTAGGTGGGCCT
GAATGGACAGTCAAGTTAGGAAGAAGAGACTCCAAAACAGCCAGCTTCTCCGCGGCAAACAGCGGCGTTATTCCGCCACCAACATCCACCCTCAGCAACCTCATCAACCGCTTCCAAGCC
GTCGGTCTATCCACTAGAGACATGGTGGCACTCTCGGGTGCACACACAATCGGACAAGCACGATGCACCACATTTAGAGCACGTATTTACAACGACACCAACATTGATGCCGCATTCGCC
AGATCACGCAGATCAAACTGCCCTCGTCCATCCGGCTCAGGCGACAACAACCTTGCACCACTTGACGTTAAAACGCCCAACAGTTTCGATAACGCTTATTATGGGAATTTAATTAGCCAA
AAGGGTTTGCTTCGGTCGGACCAGCAGTTGCACAATGGTGGCTCCACCGATTCGTTGGTGGAGCAGTACAACAAAAATCCGCGTAGTTTCTATGCGGATTTTGCGGCCGCTATGGTTAGG
ATGGGTGATATCCGTCCCCTTACCGGCCGCAATGGGGAGATTAGGAAGAATTGCAGGGTGCCTAATTAG

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTCTTCTATTCTCATCTCCTTTGCATTGCTTGCTTCTACCTTGTTCTTCATGAGTGGTCCCTCTTCAGCCCAACTCACTCCCAACTTCTACTCAAAAAGTTGCCCGAAGGTTTTT
GATGTTGTCGGCTCAGTGGTTAGGGCCGCTGTAGCCAAGGAGAAACGCATGGGTGCATCTCTCCTTAGGCTCCATTTCCACGATTGTTTTGTAAAT
GGGTGTGACGGGTCCATTCTACTA
GATGACACATCTTCGTTCACTGGAGAAAAGACTGCCAGGCCGAATGTGAATTCGGTTAGGGGTTTTAATGTGATTGATGATGTAAAGAAGAAGGTTGAAGGAGTTTGTCCCGGTGTTGTC
TCTTGTGCTGATATACTGGCGATTTCTGCTCTTGAATCCATGCTTGCT
TTAGGTGGGCCTGAATGGACAGTCAAGTTAGGAAGAAGAGACTCCAAAACAGCCAGCTTCTCCGCGGCAAAC
AGCGGCGTTATTCCGCCACCAACATCCACCCTCAGCAACCTCATCAACCGCTTCCAAGCCGTCGGTCTATCCACTAGAGACATGGTGGCACTCTCGGGTGCACACACAATCGGACAAGCA
CGATGCACCACATTTAGAGCACGTATTTACAACGACACCAACATTGATGCCGCATTCGCCAGATCACGCAGATCAAACTGCCCTCGTCCATCCGGCTCAGGCGACAACAACCTTGCACCA
CTTGACGTTAAAACGCCCAACAGTTTCGATAACGCTTATTATGGGAATTTAATTAGCCAAAAGGGTTTGCTTCGGTCGGACCAGCAGTTGCACAATGGTGGCTCCACCGATTCGTTGGTG
GAGCAGTACAACAAAAATCCGCGTAGTTTCTATGCGGATTTTGCGGCCGCTATGGTTAGGATGGGTGATATCCGTCCCCTTACCGGCCGCAATGGGGAGATTAGGAAGAATTGCAGGGTG
CCTAATTAG

Retrieve as FASTA