Entry information : CsaAPx01 (Cucsa.213340.1)
Entry ID 1901
Creation 2006-09-04 (Christophe Dunand)
Last sequence changes 2011-06-30 (Qiang Li)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2012-01-04 (Qiang LI)
Peroxidase information: CsaAPx01 (Cucsa.213340.1)
Name (synonym) CsaAPx01 (Cucsa.213340.1)
Class Ascorbate peroxidase    [Orthogroup: APx001]
Taxonomy Eukaryota Viridiplantae Streptophyta Cucurbitaceae Cucumis
Organism Cucumis sativus    [TaxId: 3659 ]
Cellular localisation Cytosolic
Tissue type Flower buds
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CsaAPx01
start..stop
S start..stop
CmAPx01 498 0 1..249 1..249
EgrAPx03 459 1e-166 1..249 1..249
MtAPx01 456 1e-165 1..249 1..250
FaAPx01-2 455 3e-165 1..249 1..250
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1116441..1116559 119 N° 2 1116655..1116829 175 N° 3 1116927..1116992 66 N° 4 1117494..1117542 49
N° 5 1117633..1117715 83 N° 6 1117870..1117949 80 N° 7 1118032..1118134 103 N° 8 1118234..1118292 59
N° 9 1118391..1118406 16  
join(1116441..1116559,1116655..1116829,1116927..1116992,1117494..1117542,1117633 ..1117715,1117870..1117949,1118032..1118134,1118234..1118292,1118391..1118406)


exon

Literature and cross-references CsaAPx01 (Cucsa.213340.1)
Literature Amako,K., Sano,S., Miyake,C., Cao,W. and Asada,K. cDNA cloning of cytosolic ascorbate peroxidase from cucumber and its overexpression in Eschrichia coli Unpublished (07-FEB-1999).
Protein ref. GenPept:   1669585 UniProtKB:   Q96399
DNA ref. Phytozome 11:   scaffold01543 (1116441..1118406)
Protein sequence: CsaAPx01 (Cucsa.213340.1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   250
PWM (Da):   %s   27377.82  
PI (pH):   %s   5.39
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MGKCYPVVSEEYQKAIEKAKRKLRGFIAEKNCAPLMLRLAWHSAGTFCKDSKTGGPFGTMRFKSELAHGANNGLDIAVRLLEPIKEQFPILSYADFYQLAGVVAVEVTGGPDVPFHPGREDKPEPPPEGRLPDATKGSDHLRDVFYTMGLSDQDIVALSGGHTLGRAHKERSGFEGPWTTNPLIFDKSYFTELLTGEKEGLLQLASDKALLSDPVFRPLVEKYAADEDAFFADYAEAHQKLSELGFADA*

Retrieve as FASTA  
Remarks Complete sequence from genomic and 2 ESTs (BAA13671, csa01-2ms3-a11/CK749121).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGAAAGTGCTACCCTGTTGTGAGTGAGGAATATCAGAAAGCCATTGAAAAGGCTAAGAGAAAACTCAGAGGATTCATCGCTGAGAAGAATTGTGCTCCTCTAATGCTTCGTCTTGCG
TATGTTCTTATTCTTGCTCATTTCTCTGATCTTATCCCTTTCTCTTGTGGACGATTGTTTAGAGATTTGCTTCGTGTTCTGGTTTCTCTTTTAGATGGCACTCTGCTGGAACCTTTTGCA
AGGATTCCAAGACTGGTGGTCCTTTTGGAACTATGAGGTTCAAAAGTGAGCTCGCCCATGGCGCCAACAATGGCCTTGACATCGCTGTTAGGCTATTGGAGCCGATCAAGGAACAGTTCC
CCATCCTCTCATATGCAGACTTTTACCAG
GTATTAATTCGTTGGTTTGATCAGATCTGTTTTTAGGGGGTTTCGAATTTGTTTGATTATTGTTTTAACTTTTGTTTGTGGGTTTAATTTG
TTGTAGTTGGCTGGTGTTGTTGCTGTTGAGGTTACTGGAGGACCCGACGTTCCTTTCCACCCTGGTAGAGAGGTCAGTGAAGATGATTAACGAATCTGTTTTAATCGTTTGGTGTGATTC
TTGTAAGTGGAGAATGTATTATGTATATGTTTCTGGATACGTATGCTCTGGTTTGTTACCTCTTTTGCCAATGTTTGTTTGTGTATTATACTTCGGCTTTTTCTCAGTGTTGCTTCTTGT
TCACTTCTTGTATCTTGGAAAGCTATTTTTCTGGTTTTGAGACTCTGTTTATAGGTGTTGTTGAGTTTCATTTGACTTGTTTAAAGGATTGATTTGGTAAATCTTCCAAAATGTCTTTGC
CTTTGCCTAATAGTTTTCACGGGGATGTCCTTTTCTCTTCTATTTTTTATCAGATTAAATTTTTTTGAAATCCCACTTGATTCTTAAACACCAATACAGCCAGCTTGGTAGATTTAGTCA
AATCATTGGGGATATTATGAAACTTATAAAGTGAGACCCCGTTTTTAATTTACAAAATGATCAAATGTTGATAATTGGGTTTCTGTTCTACAGGACAAACCCGAGCCACCACCAGAAGGC
CGCTTGCCTGATGCTACCAAGG
GTTAGTTTATATGAAAATCTTGGTATTATGTTAATGATGAAAAGTACTTCTTTTCATGATTGTTGACTTGTTGTTATGTGTTCTGTTCAGGCTCTGAT
CATCTGAGAGATGTTTTCTACACCATGGGTCTTTCGGACCAGGACATTGTTGCCCTCTCTGGTGGTCACACATTG
GTTCGTTTTGCCTCATCCTTTTAAGTAAATTGAAACTTGAATTTT
GAGCTTTGTGCATAAGTGAAAGGAATGGTTAAAAATAAATCATCGAAGTTCAATTTACTTATAAACAACAGATTAAGTTATTGGAGCTGACAATGATTTAACTTGACAGGGTAGGGCACA
CAAGGAACGATCCGGTTTCGAGGGGCCATGGACTACCAACCCTCTCATCTTTGACAAATCGTACTTCAC
GTGAGTTAAAACCATTTATACTGTGATAATTTAGTAAAGCAGTTATGAAGA
AATGTTGAAAAGAAACCGTTTGTTTCAACAGAGAACTCTTGACTGGAGAGAAGGAAGGACTTCTGCAGTTGGCATCAGACAAGGCACTTCTGTCTGACCCAGTCTTCCGCCCACTTGTCG
AAAAATATGCTGCC
GTATGTTTTCTTTTTCACCTCTCGGATCAATAAGATTCATCAGTTTACACAAAAGGTCTACTTTTACTTACCATGGATGGTCTGTTCACATTTTTGCAGGATGAGG
ATGCTTTCTTTGCTGATTATGCTGAAGCTCACCAGAAGCTTTCCGAGCTAGG
GTAAGTTTTTTCGACCACCATGTTTTTGACGTGTTGTATCGTTCATTGCTTGTGAGATAGAGAAGGGA
AGTTTGTTAACATGGTAAATGTTTATGCAGTTTTGCTGATGCTTGA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGAAAGTGCTACCCTGTTGTGAGTGAGGAATATCAGAAAGCCATTGAAAAGGCTAAGAGAAAACTCAGAGGATTCATCGCTGAGAAGAATTGTGCTCCTCTAATGCTTCGTCTTGCA
TGGCACTCTGCTGGAACCTTTTGCAAGGATTCCAAGACTGGTGGTCCTTTTGGAACTATGAGGTTCAAAAGTGAGCTCGCCCATGGCGCCAACAATGGCCTTGACATCGCTGTTAGGCTA
TTGGAGCCGATCAAGGAACAGTTCCCCATCCTCTCATATGCAGACTTTTACCAG
TTGGCTGGTGTTGTTGCTGTTGAGGTTACTGGAGGACCCGACGTTCCTTTCCACCCTGGTAGAGAG
GACAAACCCGAGCCACCACCAGAAGGCCGCTTGCCTGATGCTACCAAGGGCTCTGATCATCTGAGAGATGTTTTCTACACCATGGGTCTTTCGGACCAGGACATTGTTGCCCTCTCTGGT
GGTCACACATTG
GGTAGGGCACACAAGGAACGATCCGGTTTCGAGGGGCCATGGACTACCAACCCTCTCATCTTTGACAAATCGTACTTCACAGAACTCTTGACTGGAGAGAAGGAAGGA
CTTCTGCAGTTGGCATCAGACAAGGCACTTCTGTCTGACCCAGTCTTCCGCCCACTTGTCGAAAAATATGCTGCC
GATGAGGATGCTTTCTTTGCTGATTATGCTGAAGCTCACCAGAAG
CTTTCCGAGCTAGG
TTTTGCTGATGCTTGA

Retrieve as FASTA