Entry information : PtremPrx05
Entry ID 2080
Creation 2007-09-17 (Christophe Dunand)
Last sequence changes 2010-06-18 (Christophe Dunand)
Sequence status partial
Reviewer Qiang Li
Last annotation changes 2012-03-05 (Qiang Li)
Peroxidase information: PtremPrx05
Name PtremPrx05
Class Class III peroxidase     [Orthogroup: Prx032]*
Taxonomy Eukaryota Viridiplantae Streptophyta Salicaceae Populus
Organism Populus tremuloides (Quaking aspen)    [TaxId: 3693 ]
Cellular localisation N/D
Tissue type Roots
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PtremPrx05
start..stop
S start..stop
PtPrx37 594 0 1..294 8..301
JcPrx01 494 1e-178 1..294 4..297
RcPrx14 471 3e-169 1..294 8..302
MePrx124 461 3e-165 2..294 10..303
Literature and cross-references PtremPrx05
Literature Ranjan,P., Kao,Y.-Y., Harding,S.A., Jiang,H., Joshi,C.P. and Tsai,C-J. Expressed sequence tags from Aspen. Unpublished (2003)
EST ref. GenBank:   CA926606.1 [5' end]   CA926915.1 [Fragment]
Protein sequence: PtremPrx05
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   294 (275)
PWM (Da):   %s   32050.32 (30192.4)  
PI (pH):   %s   7.94 (8.27) Peptide Signal:   %s   cut: 20 range:20-294
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
VFxPLLAIAL CLCMANVDAG ITLQPPVKLK WHYYRRHTTC TYAEEFVRHQ VELFWKADRS ITAKLLRLLY SDCFVTGCDA SILLDGPDSE KTAPQNWGLG GFVAIDKIKE VLEIRCPGVV  SCADILNLAT RDAVHLAGGP AYPVFTGRRD GVSSKAATVD LPSPSISGEE ALAYFKSRGL DVLDLGTLLG AHSMGRTHCR YILDRxxNFN NTGRPDPSMN KAFADQMRKQ CPQRTKKGQS 
DPLVFLNPEP SSKYTLTESF YKRVLSYQSV LGVDQQLLFS NDTLQITQEF AGGF 

Retrieve as FASTA  
Remarks Partial sequence from 4 ESTs. 3' is missing. No overlap between 5'end and midle fragment. Containing motif 'YSDC'.