Entry information : PtremPrx06
Entry ID 2081
Creation 2007-09-17 (Christophe Dunand)
Last sequence changes 2007-09-17 (Christophe Dunand)
Sequence status partial
Reviewer Qiang Li
Last annotation changes 2011-01-28 (Qiang Li)
Peroxidase information: PtremPrx06
Name PtremPrx06
Class Class III peroxidase     [Orthogroup: Prx001]*
Taxonomy Eukaryota Viridiplantae Streptophyta Salicaceae Populus
Organism Populus tremuloides (Quaking aspen)    [TaxId: 3693 ]
Cellular localisation N/D
Tissue types Apex
Stems
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PtremPrx06
start..stop
S start..stop
PalPrx02 491 9e-178 1..256 83..337
PatrPrx24 481 8e-174 1..256 89..343
PkPrx05 471 2e-170 1..256 60..314
PtPrx33 468 1e-168 1..256 89..343
Literature and cross-references PtremPrx06
Literature Ranjan,P., Kao,Y.-Y., Harding,S.A., Jiang,H., Joshi,C.P. and Tsai,C-J. Expressed sequence tags from Aspen. Unpublished (2003).
EST ref. GenBank:   CA931111   CA930263 [3' end]
Protein sequence: PtremPrx06
Sequence Properties
first value : protein
second value (mature protein)
Length (aa): %sProtein length in amino acid 256
PWM (Da): %sMolecular Weight of protein
Protein Mw is calculated by the addition of average isotopic masses
of amino acids in the protein and the average isotopic mass of one water molecule.
Molecular weight values are given in Dalton (Da).
26623.96  
PI (pH): %sIso electric point of protein
Calculation done with EMBOSS parameters.
Please see Dataset for pKi calculation for more information
4.12
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
KEAxGNNNSA RGFEVVDRMK ALWESACPAT VSCADILTIA AEESVCLAxG PNWTVPLGRR DSATTASRDA ANAFLLPPTL TLDQLREGFT NVSLNNNSDL VALSGAHTFG RAKCSTFDFR  LYDFNSTGAP DPSLDPTLLA ALQELCPQGG NGSVLTNLDL TTPDAFDSNY YSNLQGNQGL LQTDQxxFST PGADDVIALV NAFSANQTAF FESFAESMIR MGNLRPLTGT EGEIRLNCKV 
VNANLAGPDS MLVSSI 

Retrieve as FASTA  
Remarks Partial sequence from 3 ESTs. 5' is missing, no overlap between the two fragments.