Entry information : PtaPrx40
Entry ID 2100
Creation 2007-09-03 (Christophe Dunand)
Last sequence changes 2007-09-03 (Christophe Dunand)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2011-01-21 (Qiang Li)
Peroxidase information: PtaPrx40
Name PtaPrx40
Class Class III peroxidase    [Orthogroup: Prx042]
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Pinus
Organism Pinus taeda (loblolly pine)    [TaxId: 3352 ]
Cellular localisation N/D
Tissue type Xylem
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PtaPrx40
start..stop
S start..stop
GbPrx09 462 2e-165 4..320 1..316
PabPrx187 454 3e-162 4..320 1..324
PabPrx18 449 2e-160 18..320 1..310
PtaPrx50 447 2e-159 17..320 13..323
Literature and cross-references PtaPrx40
Literature Sederoff,R., Molecular Basis of Wood Formation in the Pine Megagenome, unpublished
EST ref. GenBank:   DR020886 [5' end]   DR020955.1 [5' end]
Cluster/Prediction ref. UniGene:   Pta.431   Pta.34260 [5' end]
Protein sequence: PtaPrx40
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   336 (310)
PWM (Da):   %s   36795.63 (33941.1)  
PI (pH):   %s   8.41 (8.21) Peptide Signal:   %s   cut: 27 range:27-336
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MASIAAMRIA ITRVWCVVLF VTCVYGQLNP HFYDKTCPEA LSIVNSTVVQ AISEERRIGA SLLRLHFHDC FVNGCDGSVL LDDTSSFTGE KTAVPNNNSA RGFEVVDKIK KKLEQACSGV  VSCADILAIA ARDSVVTLGG PTWTVMLGRR DSRTASRSDA NNNIPPPTSD LAKLISKFRA QGLSKREMVA LSGAHTIGKA RCVNFRGHIY NDSNIDKAYA KSLQDRCPKS GDDNKLSPLD 
YKTPTKFENN YYKNLVAEKG LLHSDQELFN GVSTDSLVTE YSKNVELFER DFTAAIIKMG NITPLTGSQG EIRENCRKRN SDSAIFLSST HLIHNE 

Retrieve as FASTA  
Remarks Partial sequence from 8 + 15 ESTs (two unigenes), 3' end is missing.