Entry information : SaPrx01
Entry ID 2121
Creation 2005-08-02 (Christophe Dunand)
Last sequence changes 2005-08-02 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2019-12-10 (Christophe Dunand)
Peroxidase information: SaPrx01
Name SaPrx01
Class Class III peroxidase    [Orthogroup: Prx012]
Taxonomy Eukaryota Viridiplantae Streptophyta Orobanchaceae Striga
Organism Striga asiatica (witchweed)    [TaxId: 4170 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SaPrx01
start..stop
S start..stop
SaPrx01_other 622 0 1..321 1..322
MguPrx85 501 0 9..321 3..320
NsPrx01 486 4e-175 2..321 1..322
MguPrx43 484 2e-174 10..321 10..323
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 472532..472945 414 N° 2 471959..472124 166 N° 3 471471..471856 386  
complement(join(471471..471856,471959..472124,472532..472945))


exon

Literature and cross-references SaPrx01
Literature Kim,D., Kocz,R., Boone,L., Keyes,W.J. and Lynn,D.G.
On becoming a parasite: evaluating the role of wall oxidases in parasitic plant development
Chem. Biol. 5 (2), 103-117 (1998)
Protein ref. GenPept:   GER29792
Protein sequence: SaPrx01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   321 (295)
PWM (Da):   %s   34998.58 (31997.0)  
PI (pH):   %s   8.49 (8.57) Peptide Signal:   %s   cut: 28 range:28-322
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MMNRPNSITY IFSVISLWLL FNIQCEAQLS STFYESTCPN ATTIIRNSIR GAIARERRMA ASIIRLHFHD CFVQGCDASI LLDETPSIQS EKTAFPNVNS LRGYDVIEAA KREVERVCPG  VVSCADILTL AARDASAYVG GPSWNVRLGR RDSTTANRDQ ANTDLPSPFA TLNNLISAFD TKGLNTRDMV ALFGAHTIGQ AQCFLFRARI NSNGTDIDAG FASTRRRRCP QTGGDSNLAP 
LDLVTPNSFD NNYFKNLVQR KGLLQSDQVL FNGGSTATIV SQYSNNPRLF ASDFASAMIK MGEIPAGQPN GIIRRVCSAI N 

Retrieve as FASTA  
Remarks Complete sequence from genomic and mRNA (other strain)
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGATGAATA GACCCAATTC CATCACCTAT ATCTTTTCAG TTATCTCTCT GTGGTTATTA TTTAACATAC AATGTGAAGC ACAGTTATCC TCAACATTCT ACGAGTCCAC ATGCCCTAAT  GCAACTACCA TAATCCGAAA TTCAATCCGC GGAGCAATAG CTCGTGAGAG GCGAATGGCG GCCTCGATTA TTCGTCTCCA TTTTCATGAT TGCTTTGTCC AGGGTTGTGA TGCTTCGATA  TTGCTAGACG AGACGCCTTC AATCCAAAGT GAAAAGACTG CTTTCCCTAA TGTCAATTCA TTAAGAGGCT ATGATGTGAT TGAGGCCGCC AAACGTGAGG TCGAGCGAGT TTGTCCCGGA  GTTGTTTCGT GTGCCGATAT ATTAACGCTA GCAGCTCGTG ATGCCTCAGC TTACGTTGGT GGCCCATCAT GGAATGTGAG ACTAGGAAGA AGGGACTCAA CCACTGCCAA TCGTGATCAA  GCGAACACAG ACCTTCCGAG TCCCTTTGCC ACTCTCAACA ACCTCATTTC TGCTTTCGAC ACCAAAGGAC TTAACACAAG AGACATGGTT GCCCTTTTTG GAGCACATAC AATAGGACAA  GCACAATGCT TTTTGTTCAG GGCCAGAATT AATAGCAATG GAACTGACAT TGATGCCGGA TTTGCAAGCA CGCGAAGGCG TCGGTGCCCT CAAACGGGCG GGGATTCGAA TTTGGCCCCA  CTTGATCTGG TGACGCCAAA TTCGTTCGAT AACAACTATT TCAAGAATTT GGTGCAAAGA AAAGGCCTCC TTCAGTCGGA CCAAGTCCTT TTTAACGGAG GATCAACAGC CACAATCGTA  TCACAGTACA GTAACAACCC TAGACTTTTT GCCTCAGATT TTGCAAGTGC TATGATCAAG ATGGGTGAGA TTCCAGCAGG ACAGCCTAAT GGAATTATAA GGAGGGTCTG TAGTGCCATT 
AACTAG 

Retrieve as FASTA