Entry information : SaPrx02
Entry ID 2122
Creation 2007-01-12 (Christophe Dunand)
Last sequence changes 2007-01-12 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2019-11-27 (Christophe Dunand)
Peroxidase information: SaPrx02
Name SaPrx02
Class Class III peroxidase    [Orthogroup: Prx012]
Taxonomy Eukaryota Viridiplantae Streptophyta Orobanchaceae Striga
Organism Striga asiatica (witchweed)    [TaxId: 4170 ]
Cellular localisation N/D
Tissue type Seedlings
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SaPrx02
start..stop
S start..stop
SaPrx09 488 8e-176 1..320 1..321
OcPrx01 484 3e-174 1..321 1..325
OrPrx02 480 2e-172 23..321 27..325
MguPrx43 465 8e-167 9..321 16..323
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 418529..418939 411 N° 2 418269..418434 166 N° 3 417402..417790 389  
complement(join(417402..417790,418269..418434,418529..418939))


exon

Literature and cross-references SaPrx02
Literature Kim,D., Kocz,R., Boone,L., Keyes,W.J. and Lynn,D.G. On becoming a parasite: evaluating the role of wall oxidases in parasitic plant development Chem. Biol. 5 (2), 103-117 (1998)
Protein ref. GenBank:   GER29790.1 UniProtKB:   O49193
mRNA ref. GenBank:   AF043235 [Other strain]
Protein sequence: SaPrx02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   321 (295)
PWM (Da):   %s   35157.06 (32264.5) Transmb domain:   %s   i7-26o
PI (pH):   %s   9.66 (9.66) Peptide Signal:   %s   cut: 27 range:27-321
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MATAKLVNFL FTLTILLTIL TIPSQAQLSP TFYARTCPNA LRTIRASIWR AVARERRMAA SLIRLHFHDC FVQGCDGSVL LDDAPTIQSE KSAFPNLNSA RGFDVIEAAK RDVERLCPGV  VSCADILAVA ARDASVAVRG PSWNVRLGRR DSTTANRDAA NRELPGPFST LDGLITSFKN KSLSERDMVA LSGSHTIGQA QCFLFRSRIY SNGTDIDPFF ARLRRQSCPQ TGGDSNLSPL 
DLVTPNRLDN NYFKNLRQRR GLLQSDQVLF SGGSTDSLVF SYSINPHLFA SDFANAMLKM SEIQPLLGSN GIIRRVCNAT N 

Retrieve as FASTA  
Remarks Complete sequence from genomic and mRNA (different strain).
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCCACCG CAAAGCTCGT CAACTTTTTA TTCACCCTAA CCATACTACT CACAATACTC ACAATCCCAT CCCAAGCCCA GCTGTCCCCA ACTTTCTATG CCCGTACATG TCCCAATGCG  CTGCGTACAA TCCGTGCCTC CATCTGGCGG GCTGTGGCCC GCGAGCGCCG CATGGCAGCG TCACTCATCC GCCTCCACTT TCACGACTGC TTCGTGCAGG GCTGTGATGG TTCGGTGTTG  CTCGATGATG CGCCCACGAT CCAGAGTGAG AAGTCGGCTT TCCCTAACTT GAACTCCGCA AGAGGGTTTG ACGTGATTGA GGCCGCCAAG AGAGATGTCG AGCGTTTGTG CCCAGGTGTC  GTCTCCTGTG CGGACATTCT GGCCGTGGCC GCACGTGATG CCTCGGTGGC GGTCCGTGGG CCGTCATGGA ACGTGAGGCT CGGGAGAAGG GACTCTACCA CAGCTAATCG TGATGCGGCA  AACCGTGAAC TACCGGGGCC ATTTTCCACC CTTGATGGCC TAATCACGTC TTTTAAGAAT AAGAGCCTCA GTGAAAGAGA CATGGTTGCC CTCTCTGGAT CACACACGAT CGGGCAAGCG  CAGTGCTTCC TGTTCCGAAG CAGGATCTAC AGCAATGGCA CGGATATCGA TCCATTCTTT GCCCGTCTGA GGAGACAGTC TTGCCCTCAG ACGGGTGGGG ATAGCAACCT TTCCCCACTC  GACCTTGTAA CCCCCAACAG GCTCGACAAC AACTACTTTA AGAACCTTCG TCAAAGGAGG GGTCTCCTTC AGTCGGACCA AGTCCTTTTT AGCGGGGGCT CTACAGACAG TCTAGTTTTC  AGCTACAGCA TAAATCCTCA CCTATTCGCC TCCGATTTCG CTAATGCCAT GCTCAAGATG TCTGAGATTC AGCCATTGCT CGGGTCGAAT GGGATCATAA GGAGGGTTTG TAACGCCACA 
AACTAA 

Retrieve as FASTA