Entry information : FaPrx01
Entry ID 2252
Creation 2005-09-22 (Christophe Dunand)
Last sequence changes 2016-01-07 (Christophe Dunand)
Sequence status complete
Reviewer Achraf Jemmat
Last annotation changes 2016-01-07 (Achraf Jemmat)
Peroxidase information: FaPrx01
Name FaPrx01
Class Class III peroxidase    [Orthogroup: Prx009]
Taxonomy Eukaryota Viridiplantae Streptophyta Rosaceae Fragaria
Organism Fragaria x ananassa (strawberry)    [TaxId: 3747 ]
Cellular localisation N/D
Tissue type Whole plant
Inducer Salicylic acid treatment
Repressor N/D
Best BLASTp hits
Perox score E-value FaPrx01
start..stop
S start..stop
FvPrx02 689 0 1..330 1..330
PpePrx12 628 0 16..330 15..328
MdPrx02 623 0 18..329 22..333
TcPrx18 614 0 1..330 1..329
Literature and cross-references FaPrx01
Literature REFERENCE 1 Folta,K. et al., Development of an EST Database for Octoploid Strawberry (Fragaria x annanasa, cv. 'Strawberry Festival'). Unpublished (2004).
REFERENCE 2 Yeh,S.Y., Huang,F.C., Hoffmann,T., Mayershofer,M. and Schwab,W. FaPOD27 functions in the metabolism of polyphenols in strawberry fruit (Fragaria sp.). Front Plant Sci 5, 518 (2014)
mRNA ref. GenBank:   JX290512.1
EST ref. GenBank:   CO816689.1 [5' end]   AJ871760.1 [3' end]   GT149290.1 [Fragment]
Protein sequence: FaPrx01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   331 (308)
PWM (Da):   %s   37576.93 (35047.6)  
PI (pH):   %s   7.74 (7.50) Peptide Signal:   %s   cut: 23 range:23-330
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGSRALFFFF ALLSLSAVLC FAESNEEDPG LVMNFYSDSC PQAEEIVREQ VKLLYKRHKN TAFSWLRNIF HDCAVQSCDA SLLLDSTRRS LSEKEMDRSF GMRNFRYIEE IKEALERECP  GVVSCSDILV LSAREGVVRL GGPFIPLKTG RRDGRRSRAE ILEEYLPDHN ESMSTVLEKF SAMGIDTPGV VALLGAHSVG RTHCVKLVHR LYPEVDPALN PDHVPHMLKK CPDAIPDPKA 
VQYVRNDRGT PMIFDNNYYR NILDNKGLMM VDHQLATDKR TKPYVKKMAK SQDYFFKEFT RAFTILSENN PLTGDKGEIR QQCNVANKLH * 

Retrieve as FASTA  
Remarks Complete sequence from 5 ESTs. Cultivar "Strawberry festival" (octoploid), "Elsanta".
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGTTCCA GAGCTCTCTT CTTCTTCTTT GCCTTGCTAT CTCTCTCAGC AGTGCTTTGC TTTGCTGAGA GCAATGAAGA AGACCCTGGT CTTGTTATGA ACTTCTATAG TGACTCATGT  CCTCAGGCTG AGGAGATCGT CAGAGAGCAG GTCAAGCTTC TCTACAAGCG CCACAAGAAC ACTGCTTTCT CTTGGCTCAG GAACATCTTC CATGACTGTG CTGTCCAGTC ATGTGATGCT  TCACTACTTT TGGACTCAAC AAGGAGGTCT TTGTCTGAGA AGGAAATGGA CAGAAGCTTT GGGATGAGAA ACTTCAGGTA CATTGAGGAG ATCAAAGAAG CATTAGAGAG GGAGTGCCCT  GGAGTTGTTT CTTGCTCAGA TATTCTTGTC TTGTCAGCCA GAGAAGGAGT TGTTAGGCTA GGAGGTCCAT TCATCCCTCT TAAAACTGGA AGGAGAGATG GTAGAAGGAG CAGAGCTGAG  ATCCTTGAGG AGTACCTTCC TGACCACAAT GAGAGCATGT CAACTGTTCT TGAGAAATTC TCTGCCATGG GCATTGACAC CCCTGGAGTT GTTGCCCTTC TTGGAGCTCA CAGTGTTGGA  AGAACACACT GTGTGAAGCT GGTGCACCGT TTGTACCCAG AAGTAGACCC AGCTCTGAAC CCAGACCATG TCCCTCACAT GCTTAAGAAG TGCCCTGATG CCATCCCTGA CCCCAAGGCA  GTCCAGTACG TGAGGAATGA CCGTGGTACC CCCATGATCT TCGACAACAA CTACTACAGG AACATCTTGG ACAACAAGGG TTTGATGATG GTGGACCACC AGCTTGCCAC AGACAAGAGG  ACCAAGCCCT ATGTCAAGAA GATGGCCAAA AGCCAGGACT ATTTCTTCAA GGAGTTCACA AGAGCCTTCA CCATTCTCTC CGAGAACAAC CCTCTTACCG GAGACAAGGG AGAGATCAGG 
CAACAGTGCA ATGTGGCCAA CAAGCTCCAC TAG 

Retrieve as FASTA