Entry information : PpePrx12 (ppa008503m)
Entry ID 2258
Creation 2005-09-23 (Christophe Dunand)
Last sequence changes 2011-06-29 (Christophe Dunand)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2011-12-16 (Qiang Li)
Peroxidase information: PpePrx12 (ppa008503m)
Name (synonym) PpePrx12 (ppa008503m)
Class Class III peroxidase    [Orthogroup: Prx009]
Taxonomy Eukaryota Viridiplantae Streptophyta Rosaceae Prunus
Organism Prunus persica (peach)    [TaxId: 3760 ]
Cellular localisation N/D
Tissue type Fruits
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PpePrx12
start..stop
S start..stop
MdPrx02 630 0 17..329 22..335
FvPrx02 624 0 17..328 18..330
FaPrx01 624 0 17..328 18..330
TcPrx18 611 0 2..328 3..329
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 992673..992894 222 N° 2 992996..993184 189 N° 3 993580..993745 166 N° 4 993882..994294 413
join(992673..992894,992996..993184,993580..993745,993882..994294)


exon

Literature and cross-references PpePrx12 (ppa008503m)
Literature Le Dantec,L., Cosson,P., Renaud,C., Garcia,V., Dumoulin,P., Rothan ,C., Filippi,G., Laigret,F., Moing,A. and Dirlewanger,E.
Peach (Prunus persica (L.) Batsch) fruit ESTs from two early development stages, Unpublished (2004).

DNA ref. Phytozome 11:   scaffold_4 (992673..994294)
EST ref. GenBank:   AJ872394 [3' end]
Protein sequence: PpePrx12 (ppa008503m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   330 (308)
PWM (Da):   %s   37509.85 (35127.7)  
PI (pH):   %s   7.97 (7.77) Peptide Signal:   %s   cut: 22 range:22-329
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MSSRALFFFALLAFSAVSCFAENEEDPGLVMDFYKDSCPQAEDVIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRRSLSEKEMDRSFGMRNFRYIEEIKEALERECPGVVSCSDILVLSAREGVVRLGGPFIPLKTGRRDGRRSRAEILEQYLPDHNESMSTVLEKFADMGIDTPGLVALLGAHSVGRTHCVKLVHRLYPEVDPQLNPDHVGHMLKKCPDAIPDPKAVQYVRNDRGTPMIFDNNYYRNILDNKGLMMVDHQLATDKRTKPYVKKMAKSQDYFFKEFSKAFTILSENNPLTGTKGEIRQQCNVANKIHD

Retrieve as FASTA  
Remarks Complete sequence from genomic and 1 EST. Cultivar "Fantasia".
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAGTTCCAGAGCTCTCTTCTTCTTTGCTTTGCTAGCTTTCTCAGCAGTGTCTTGTTTTGCTGAGAATGAAGAGGACCCAGGTCTTGTTATGGACTTTTACAAGGACAGCTGTCCTCAG
GCTGAAGATGTTATCAGAGAACAAGTCAAGCTTCTCTACAAGCGCCACAAGAACACTGCATTCTCTTGGCTCAGAAACATCTTCCATGACTGTGCTGTCCAG
GTATATTTATATTTCTGA
TAAATATTTGCTGGTTTTCTGTTAGTTAATTATTTAACCNNNNNNNNNNNNNNNNNNNNTTGGGTTTTGTGGGATTTTTACAGTCATGTGATGCTTCCCTGCTGCTGGACTCAACCAGGA
GGTCCTTGTCTGAGAAGGAGATGGACAGGAGCTTTGGGATGAGAAACTTTAGGTACATTGAAGAAATTAAAGAAGCACTGGAGAGGGAGTGCCCTGGAGTTGTTTCTTGTTCAGATATTC
TTGTTTTGTCTGCTAGGGAGGGTGTTGTTCGG
GTACTTTCCTCCTTGACCTCTCTTTTTCTTTGACTTGACTCTCTTTCTTCTGTAAAACAGAGATCTCAAGTTGGTACAATTTGGTTTT
GATCTTTATTTAGTAAAATTTGACAAGAACTCAAGTTTTATTATTCCCTTTTCAGCTAAAAGATAACGAGGATTTTCACAGATTTTTGTCCAACAAATACCACTAAAGCTGTTGTTACCT
TTTTTTTCTTGTGGTTTTTGGTACATTTTTCATATTCTGTTGGTCTGTAAAACAGAGATCTGAACTATTTGTACAGATTTTTATCTATTTCTGGGACCCCAAGGCTGTTTCCTTTTAATT
GTGGATTTGGTAGATTTGTCAAGTACAATTCTCTTAATTATTTTCGACTTTATTACTGTGTTCTCAGCTAGGAGGCCCATTCATCCCTCTCAAAACTGGAAGAAGAGATGGAAGGAGGAG
CAGAGCAGAGATCCTTGAGCAATACCTTCCTGACCACAATGAGAGCATGTCCACTGTCCTTGAGAAGTTTGCTGACATGGGCATTGACACCCCTGGTCTGGTTGCCCTGCTAG
GTATATA
TGCACATCACCATCCATCGATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTTTAAAGTTCTTAAACATCATTAGCATGATTAGCATGCATGTTACTTCACTGATTATGGTCTAATTGT
AATTAACAGGAGCTCACAGTGTTGGTAGAACACACTGTGTGAAGCTGGTGCACCGTTTATACCCAGAAGTTGACCCTCAGCTCAACCCTGACCATGTTGGTCACATGCTCAAGAAGTGCC
CTGATGCAATCCCTGACCCCAAAGCGGTTCAATATGTGAGAAATGACCGCGGTACCCCCATGATATTTGACAACAACTACTACAGGAACATTTTGGACAACAAGGGTTTGATGATGGTGG
ATCACCAACTAGCCACAGACAAGAGGACAAAACCCTATGTCAAGAAAATGGCCAAGAGCCAAGACTACTTCTTTAAGGAGTTTTCAAAAGCTTTCACCATTCTCTCTGAGAACAACCCTC
TTACAGGAACAAAGGGAGAGATCAGGCAGCAGTGCAATGTTGCCAACAAGATCCACGACTAG

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAGTTCCAGAGCTCTCTTCTTCTTTGCTTTGCTAGCTTTCTCAGCAGTGTCTTGTTTTGCTGAGAATGAAGAGGACCCAGGTCTTGTTATGGACTTTTACAAGGACAGCTGTCCTCAG
GCTGAAGATGTTATCAGAGAACAAGTCAAGCTTCTCTACAAGCGCCACAAGAACACTGCATTCTCTTGGCTCAGAAACATCTTCCATGACTGTGCTGTCCAG
TCATGTGATGCTTCCCTG
CTGCTGGACTCAACCAGGAGGTCCTTGTCTGAGAAGGAGATGGACAGGAGCTTTGGGATGAGAAACTTTAGGTACATTGAAGAAATTAAAGAAGCACTGGAGAGGGAGTGCCCTGGAGTT
GTTTCTTGTTCAGATATTCTTGTTTTGTCTGCTAGGGAGGGTGTTGTTCGG
CTAGGAGGCCCATTCATCCCTCTCAAAACTGGAAGAAGAGATGGAAGGAGGAGCAGAGCAGAGATCCTT
GAGCAATACCTTCCTGACCACAATGAGAGCATGTCCACTGTCCTTGAGAAGTTTGCTGACATGGGCATTGACACCCCTGGTCTGGTTGCCCTGCTAG
GAGCTCACAGTGTTGGTAGAACA
CACTGTGTGAAGCTGGTGCACCGTTTATACCCAGAAGTTGACCCTCAGCTCAACCCTGACCATGTTGGTCACATGCTCAAGAAGTGCCCTGATGCAATCCCTGACCCCAAAGCGGTTCAA
TATGTGAGAAATGACCGCGGTACCCCCATGATATTTGACAACAACTACTACAGGAACATTTTGGACAACAAGGGTTTGATGATGGTGGATCACCAACTAGCCACAGACAAGAGGACAAAA
CCCTATGTCAAGAAAATGGCCAAGAGCCAAGACTACTTCTTTAAGGAGTTTTCAAAAGCTTTCACCATTCTCTCTGAGAACAACCCTCTTACAGGAACAAAGGGAGAGATCAGGCAGCAG
TGCAATGTTGCCAACAAGATCCACGACTAG

Retrieve as FASTA