Entry information : PpePrx18 (ppa008577m)
Entry ID 2260
Creation 2005-09-26 (Christophe Dunand)
Last sequence changes 2011-12-07 (Qiang Li)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2016-01-08 (Christophe Dunand)
Peroxidase information: PpePrx18 (ppa008577m)
Name (synonym) PpePrx18 (ppa008577m)
Class Class III peroxidase    [Orthogroup: Prx002]
Taxonomy Eukaryota Viridiplantae Streptophyta Rosaceae Prunus
Organism Prunus persica (peach)    [TaxId: 3760 ]
Cellular localisation N/D
Tissue type Fruits
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PpePrx18
start..stop
S start..stop
CclPrx36 532 0 5..326 8..327
VvPrx24 525 0 21..326 18..323
RcPrx41 516 0 22..326 23..320
CsaPrx08 505 0 25..326 25..326
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 20214218..20215195 978  
complement(join(20214218..20215195))


exon

Literature and cross-references PpePrx18 (ppa008577m)
Literature Le Dantec,L., Cosson,P., Renaud,C., Garcia,V., Dumoulin,P., Rothan ,C., Filippi,G., Laigret,F., Moing,A. and Dirlewanger,E.
Peach (Prunus persica (L.) Batsch) fruit ESTs from two early development stages. Unpublished (2004).
DNA ref. Phytozome 12:   scaffold_3 (20215195..20214218)
EST ref. GenBank:   AJ873446.1 [5' end]   AJ873648.1 [3' end]
Protein sequence: PpePrx18 (ppa008577m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   326 (303)
PWM (Da):   %s   35967.99 (33535.6)  
PI (pH):   %s   8 (8.20) Peptide Signal:   %s   cut: 24 range:24-326
Sequence
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Send to Peroxiscan
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MVAFLIVFLT SLLTLTTLPA AESRLYSNYY QKSCPRFNQI VQDTVTNKQI TSPTTAAATL RLFFHDCLHN GCDASILVSS TPFNKAERDA DINLSLPGDA FDVVVRAKTA LELACPNTVS  CADILAVATR DLVTMMGGPY YNVPLGRRDG RVSKASAVEG TLPRPAMPVS QLIQVFGSRG FSVQEMVALS GAHTIGFTHC SEFSSAIYNY SKSEQYDPQY NPRFAAGLQQ ACADYHKNPT 
MSVFNDVMTP NKFDNVYFQN LPKGLGLLKS DHALLNDPRT RPFVELYAKD QNTFFQAFAR AMEKLGLHGI QTGRRGEIRH RCDEFN 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron) and 2 ESTs. Cultivar="Fantasia".
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGTAGCGT TCCTCATTGT CTTCCTCACA TCTCTGCTAA CTCTCACCAC TCTCCCCGCC GCAGAGTCGA GACTCTACAG CAACTACTAC CAAAAATCGT GCCCGAGATT CAACCAAATC  GTCCAAGACA CCGTCACCAA CAAGCAGATC ACCAGCCCCA CTACCGCCGC CGCCACCCTC CGCCTCTTCT TCCACGACTG CCTCCACAAC GGCTGCGACG CCTCCATCCT CGTCTCCTCC  ACCCCCTTCA ACAAGGCCGA GCGCGACGCC GACATCAATC TCTCCCTCCC CGGCGACGCC TTCGACGTCG TCGTTCGCGC CAAGACTGCC CTCGAACTAG CCTGCCCCAA CACCGTCTCC  TGCGCCGACA TCCTCGCCGT CGCCACCCGC GACCTCGTCA CCATGATGGG CGGGCCCTAC TACAACGTAC CGCTCGGCCG CCGCGACGGC CGAGTCTCCA AGGCCTCCGC CGTCGAGGGC  ACCCTCCCGA GGCCAGCCAT GCCGGTGTCT CAGCTCATCC AGGTGTTCGG GTCCAGGGGC TTTTCCGTCC AGGAAATGGT TGCCCTCAGT GGGGCCCACA CCATCGGGTT CACCCACTGC  AGCGAGTTCA GCTCCGCGAT CTACAACTAC AGCAAGTCGG AGCAGTACGA CCCGCAGTAC AACCCGAGAT TCGCCGCCGG GTTGCAGCAG GCCTGCGCCG ATTACCACAA GAACCCGACG  ATGTCGGTGT TCAACGACGT AATGACCCCC AACAAATTCG ACAATGTCTA CTTCCAGAAC TTGCCCAAGG GTTTGGGGCT TTTGAAGTCG GATCACGCCT TGTTAAATGA CCCGAGAACC  CGGCCCTTCG TGGAGCTCTA CGCCAAGGAC CAGAACACCT TCTTTCAGGC GTTTGCGAGG GCGATGGAGA AGCTCGGCCT GCACGGGATC CAGACCGGGA GGCGAGGAGA GATTAGGCAC 
AGATGCGATG AGTTCAAT 

Retrieve as FASTA  
CDS
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGTAGCGT TCCTCATTGT CTTCCTCACA TCTCTGCTAA CTCTCACCAC TCTCCCCGCC GCAGAGTCGA GACTCTACAG CAACTACTAC CAAAAATCGT GCCCGAGATT CAACCAAATC  GTCCAAGACA CCGTCACCAA CAAGCAGATC ACCAGCCCCA CTACCGCCGC CGCCACCCTC CGCCTCTTCT TCCACGACTG CCTCCACAAC GGCTGCGACG CCTCCATCCT CGTCTCCTCC  ACCCCCTTCA ACAAGGCCGA GCGCGACGCC GACATCAATC TCTCCCTCCC CGGCGACGCC TTCGACGTCG TCGTTCGCGC CAAGACTGCC CTCGAACTAG CCTGCCCCAA CACCGTCTCC  TGCGCCGACA TCCTCGCCGT CGCCACCCGC GACCTCGTCA CCATGATGGG CGGGCCCTAC TACAACGTAC CGCTCGGCCG CCGCGACGGC CGAGTCTCCA AGGCCTCCGC CGTCGAGGGC  ACCCTCCCGA GGCCAGCCAT GCCGGTGTCT CAGCTCATCC AGGTGTTCGG GTCCAGGGGC TTTTCCGTCC AGGAAATGGT TGCCCTCAGT GGGGCCCACA CCATCGGGTT CACCCACTGC  AGCGAGTTCA GCTCCGCGAT CTACAACTAC AGCAAGTCGG AGCAGTACGA CCCGCAGTAC AACCCGAGAT TCGCCGCCGG GTTGCAGCAG GCCTGCGCCG ATTACCACAA GAACCCGACG  ATGTCGGTGT TCAACGACGT AATGACCCCC AACAAATTCG ACAATGTCTA CTTCCAGAAC TTGCCCAAGG GTTTGGGGCT TTTGAAGTCG GATCACGCCT TGTTAAATGA CCCGAGAACC  CGGCCCTTCG TGGAGCTCTA CGCCAAGGAC CAGAACACCT TCTTTCAGGC GTTTGCGAGG GCGATGGAGA AGCTCGGCCT GCACGGGATC CAGACCGGGA GGCGAGGAGA GATTAGGCAC 
AGATGCGATG AGTTCAAT 

Retrieve as FASTA